Gene detail information of Glyur000093s00009385 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60760.1 | 0 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_007132294.1 | 0 | hypothetical protein PHAVU_011G082700g [Phaseolus vulgaris] |
| COG | NP_295237.1 | 5.00E-21 | 2-phosphoglycerate kinase [Deinococcus radiodurans R1] |
| trEMBL | tr|V7AFI3|V7AFI3_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04289.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00093 | 166811 | 172392 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000093s00009385.1 | PF13207.1 | AAA_17 | 187 | 226 | 4.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.885 |
| SRR1783600 | control | 0.918 |
| SRR1783602 | moderate drought stress | 0.857 |
| SRR1811619 | moderate drought stress | 0.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.533 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.438 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.407 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.862 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.974 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.288 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.753 |
| SRR2868004 | Drought Stress (root) | 10.228 |
| SRR2967015 | Control (root) | 5.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.757 |
| SRR9715740 | Leaf | 4.024 |
| SRR9715741 | Leaf | 4.745 |
| SRR9715739 | Root | 0.777 |
| SRR9715742 | Root | 3.192 |
| SRR9715743 | Root | 2.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.615 |
| SRR8749028 | MeJA induced 9h | 8.564 |
| SRR8749029 | MeJA induced 9h | 16.209 |
| SRR8749030 | Uninduced | 39.833 |
| SRR8749031 | Uninduced | 43.432 |
| SRR8749032 | Uninduced | 28.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.601 |
| SRR8400027 | Control - Root | 4.250 |