Gene detail information of Glyur000093s00009381 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10350.2 | 3.00E-12 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_004506046.1 | 8.86E-16 | PREDICTED: putative arsenical pump-driving ATPase-like [Cicer arietinum] |
| trEMBL | tr|I3SP52|I3SP52_MEDTR | 7.00E-15 | Uncharacterized protein {ECO:0000313|EMBL:AFK42044.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00093 | 143071 | 144679 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.413 |
| SRR1783600 | control | 0.490 |
| SRR1783602 | moderate drought stress | 1.508 |
| SRR1811619 | moderate drought stress | 1.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.558 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.028 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.542 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.592 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.671 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.212 |
| SRR2868004 | Drought Stress (root) | 4.097 |
| SRR2967015 | Control (root) | 5.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.035 |
| SRR9715740 | Leaf | 0.147 |
| SRR9715741 | Leaf | 0.586 |
| SRR9715739 | Root | 0.249 |
| SRR9715742 | Root | 0.404 |
| SRR9715743 | Root | 0.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.026 |
| SRR8749028 | MeJA induced 9h | 3.447 |
| SRR8749029 | MeJA induced 9h | 1.604 |
| SRR8749030 | Uninduced | 2.738 |
| SRR8749031 | Uninduced | 1.702 |
| SRR8749032 | Uninduced | 1.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.432 |
| SRR8400027 | Control - Root | 3.661 |