Gene detail information of Glyur000093s00009372 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08060.2 | 5.00E-22 | ATP-dependent helicase family protein |
| NR | XP_007132281.1 | 0 | hypothetical protein PHAVU_011G081700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9M658|MOM1_ARATH | 6.00E-25 | Helicase protein MOM1 |
| trEMBL | tr|V7AG89|V7AG89_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04275.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00093 | 81785 | 93168 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.991 |
| SRR1783600 | control | 43.371 |
| SRR1783602 | moderate drought stress | 82.826 |
| SRR1811619 | moderate drought stress | 82.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.164 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.395 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.743 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.866 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.876 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.226 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.335 |
| SRR2868004 | Drought Stress (root) | 28.424 |
| SRR2967015 | Control (root) | 29.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.223 |
| SRR9715740 | Leaf | 12.625 |
| SRR9715741 | Leaf | 13.893 |
| SRR9715739 | Root | 4.372 |
| SRR9715742 | Root | 21.424 |
| SRR9715743 | Root | 19.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.188 |
| SRR8749028 | MeJA induced 9h | 33.753 |
| SRR8749029 | MeJA induced 9h | 23.218 |
| SRR8749030 | Uninduced | 16.999 |
| SRR8749031 | Uninduced | 16.796 |
| SRR8749032 | Uninduced | 19.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.869 |
| SRR8400027 | Control - Root | 31.276 |