Gene detail information of Glyur000092s00007550 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55410.2 | 1.00E-16 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | NP_001235199.1 | 1.50E-50 | uncharacterized protein LOC100527120 precursor [Glycine max] |
| Swissprot | tr|Q8W453|DIRL1_ARATH | 1.00E-16 | Putative lipid-transfer protein DIR1 (Precursor) |
| trEMBL | tr|C6T3C8|C6T3C8_SOYBN | 6.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G17000.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 353122 | 356105 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007550.1 | PF14368.1 | LTP_2 | 16 | 102 | 1.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 266.055 |
| SRR1783600 | control | 267.808 |
| SRR1783602 | moderate drought stress | 216.771 |
| SRR1811619 | moderate drought stress | 215.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 121.586 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 120.329 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.391 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.528 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 162.469 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 162.012 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 346.758 |
| SRR2868004 | Drought Stress (root) | 324.330 |
| SRR2967015 | Control (root) | 259.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.266 |
| SRR9715740 | Leaf | 15.506 |
| SRR9715741 | Leaf | 21.720 |
| SRR9715739 | Root | 84.781 |
| SRR9715742 | Root | 184.346 |
| SRR9715743 | Root | 162.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.553 |
| SRR8749028 | MeJA induced 9h | 4.397 |
| SRR8749029 | MeJA induced 9h | 6.815 |
| SRR8749030 | Uninduced | 2.439 |
| SRR8749031 | Uninduced | 1.718 |
| SRR8749032 | Uninduced | 2.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 532.889 |
| SRR8400027 | Control - Root | 462.874 |