Gene detail information of Glyur000092s00007545 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30410.2 | 1.00E-50 | tubulin folding cofactor A (KIESEL) |
| NR | XP_004491528.1 | 1.18E-67 | PREDICTED: tubulin-specific chaperone A-like [Cicer arietinum] |
| Swissprot | tr|O04350|TBCA_ARATH | 3.00E-64 | Tubulin-folding cofactor A |
| trEMBL | tr|C6T107|C6T107_SOYBN | 3.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 328476 | 330670 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007545.1 | PF02970.11 | TBCA | 6 | 90 | 3.00E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 182.105 |
| SRR1783600 | control | 183.289 |
| SRR1783602 | moderate drought stress | 98.969 |
| SRR1811619 | moderate drought stress | 98.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 181.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 177.464 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 133.566 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 131.220 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 126.327 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 127.699 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 56.406 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 56.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 124.363 |
| SRR2868004 | Drought Stress (root) | 86.173 |
| SRR2967015 | Control (root) | 115.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.096 |
| SRR9715740 | Leaf | 36.163 |
| SRR9715741 | Leaf | 33.086 |
| SRR9715739 | Root | 49.501 |
| SRR9715742 | Root | 78.575 |
| SRR9715743 | Root | 77.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 143.627 |
| SRR8749028 | MeJA induced 9h | 57.578 |
| SRR8749029 | MeJA induced 9h | 102.233 |
| SRR8749030 | Uninduced | 26.542 |
| SRR8749031 | Uninduced | 15.238 |
| SRR8749032 | Uninduced | 35.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 158.605 |
| SRR8400027 | Control - Root | 156.869 |