Gene detail

Gene detail information of Glyur000092s00007543

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G20150.1	Kinesin motor family protein
NR	XP_004491454.1	PREDICTED: kinesin-like protein KIN12B-like [Cicer arietinum]
Swissprot	tr\|Q8L7Y8\|KN12B_ARATH	Kinesin-like protein KIN12B
trEMBL	tr\|K7KBK0\|K7KBK0_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000092s00007543.1
ATGTCCACCTCCTCATCTATCAGAAATCTTCTTCCCAGATCAATCTCTTTCAAGCAAAAATCTACTTCAAACCCTAAATTCCCAAATCCAGATGCCGAAAACACTCCCCCCGCCGACCCCAACATTCCGATCAACCACCACCACCAATCAGCCAAGCAATCACACTCCAAAACCCCAATTTCAACAACGACCCATCTAACCCAATCCAAACCCCCTCTTGAATCGGACCCATCAGTGAAGGCAATACGAATCAGACCTACCAATAACAATGGGATATTGGGAGATCGAACGGTTAAGAANGTTTCTTCTGATACCTTGTGTGTTGGGGATAGGCAATTTACATTTGATTCAGTTTTTGACTCCAAGTCCAGTCAGGAAGATATTTTTCAATCAGTGGGTGTTCCCTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGANTTATACAATGTGGGGTCCCCCAAGTGCCATCTTTGAGGAGCGCTCGTCCCAAAGTCACAAGGGAATTGTTCCTCGGATATTCCAAATGTTATTTTCTGAGCTTGAAAAAGAGCAGCATATGTCTGAGGGGAAACAGTTCAACTATCAATGTCGATGTTGTTTTCTTGAGATATACAATGAACAAATTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGATGAANGATGATTCCAAACATGCATTGTATATAGAAAATCTGACCGAGGAATATGTCACTAGCTATGATGAGGTGACACAAATTCTGATCAAGGGCCTTTCGAGCAGAAAAGTTGGAGCAACAAGCTTAAATTCTAAGAGCTCTAGATCGCATATCNTTTTCACTTTTGTGATTGAGTCTTGGTGCAAGGGAACCTCGTCAAATGGTTTCAGTAGTTCAAAAACTAGCAGAATTAGCCTTATTGATCTTGCTGGACAGGACAGGAACAAAATTGATGGTGCAGGCAGACAATGTCTAAGGGAAACCAAAAATGTAAAGAAGTCCTTATCTCAGCTTGGGCGCTTAGTAGATGCTTTGACTAAAGAAACTTGCTCAGGAAAAGCAAAAGAAATTCCAAACAGGAACTCCTGTTTAACACGTTTACTACATGAATCACTTGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATCTCCCCTGATGACAAGAATAATGGTGAAACACTGCGCACACTCAGATTTGGACAGCGAGTAAGATCCATTAGAAATGAACCTGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTGAGTGATCAAATCCGACAGCTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCATAGCTCTGATGGGAATAAAAATGGATACTTCCAAGTACGCAATGTGCGGGAAAGCATCAATCAATTGAGGGTCAGCTTAAACCGCTCTCTACTCCTACCTAACATTGATAACGATGCTGATGAAGAGGTGAATGTAGACGAGGAAGACATAAGGCAATTGCGCCAGCAGATTGATGAATTTTATAGTTCATGTGAATTGAATCCTAAAGACATCTCTGTCAGTGAAGATTGTGTCCAGTATTATTCTGTTGAGGAAAGTTGTGATGCAGACATGACAAGTGGTGATGAAATTGAAAAGGAGGAAGTATGTTCGGGAGAAACATTGAGTAAGCTTTGTCATGAGGACAGTGTGGCATCAGCTAACACCTTGTATGCATCAGCAGATGATCTTGTATGCACAGCTAACACCTCAAGGGCAATTAAATCTACTTTCAGAGATAGCATTTCGGTTAGTTCATGCTGTCGGTCTTCAATACTTGAGGAACCACAGTTGTCTGAGTCTCCAAAAATCAGGAATATACAGAGGAAAAGCGTGGCCTTTTCATCTAGTTGTCTTGGAAGCCAGAACAATGTGGCAGAGGACAATTCAAGTTCCAGTAAGGATTTGTTAGGACAATCATTTAAAAAGGAAGAACTTATGCGATCCTCACTAAGATCAAGCAAGGTTTTTCCAGGTCCAACTGAGTCCTTGGCAGCAAGCCTTCAGAGGGGATTGCAGATAATTGATCATCACCAACGGAACTCTGCATTAAACAAATCTTCAGCTTCCTTCTCTTTTCAGNACTTAGCTTTGGGTGATTCTTGTGACGGAACAATGCAACTGAAGAAATATTCTATTGATGAAAGAACTGCTTCTTTGCTTTGTGATTCTTGCCGTAAAAAAGTATCTGATCAGGATTCCTGTGAGCTTCAAGGTAGCTTGAAGTCAAGGAGTGACACAGCTCAAGCAGAAAATTTGAATGGACTGACAGATAAGGATGTGGAAAATACAATGGCAAAAGCGAGCATTAGAGAAAAAGAGCTCGAGAATGTTTGCAAGGAGCAAGCAGCTAGAATTGATGAACTAAATCAATTGGTGGAGAAACTTAAAGGAGAAAAAGAACTAAACTCCATTACTGTGTATGGTCAAGATAGCAACAAGCAGCCTGGACATGGAGAAGAGCATAGTAACTCATTGAAAGATGAATGCAAGCTTCTGAGGGGCACTTCCTCAGCCAGCCATTTAGAAGAAAAATGTGAAATCAAAGAAATCCAGGAAGAATTAAATCAAAGAACCAGCTCTTTTGATGCTACTGAGAAGGAAGAACTTCTAAAGAAAATTCAGAGTCTAAGAAGCAAGCTGCAATTGTATGGTGATGCACCAGTTAAAATGTCCACTGACAAACTTAGATCTTCATTAATATCAAGATCCATTCAACTGCGAAAAAGTGGTGTATTTTCTCATGATAATGGTGGGGAAGAGCTAGAGAAAGAAAGAGAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTGAGAGTTGATCTCGAGGCCAACCNCCAGCGGGCAGAGAGGGTGGAGATGGAATTGAGGTTAGAGAAGAAGTGCACTGAAGAGTTAGATGATGCACTAAAAAGGTCGGTTCTTGGACATGCTAGAATGGTGGAGCACTATGTTGACCTCCAAGAAAAGTATAATGATTTGGTTGCAAAGCACAATGCTATAATGCATGGTATAGCTGAGGTGAAGAAGGCAGCAGCAAAGGCTGGAAAAAGGGGTCGCGCCCGCTTTGCCAAATCTCTTGCCGCTGAGCTTTCTGCATTGAGGGTGGAGAGAGAAAGGGAAGCAAAATCATTGAAAAAGGAGAACACGAGTCTCAAGATTCAACTTAGAGACACTGCAGAAGCTGTTCATGCAGCTGGAGAACTACTAGTTAGACTCAGAGAAGCTGAGCATGCAGCATCTATAGCAGAGGAGAATTTTACAAAAGTGCAACAAGATAATGAAAAGCTTAAAAGGCAAATNGATAAGCTCAAAAGAAAACACAAGATGGAGATGATTACCATGAAGCAATACCTTGCAGAGAGCAAATTACCCGAGTCTGCACTGCAACCACTATTTAGAGAGGATTCTGATGTGGTCCACAACAATGCAACTCCCCATCCAGATGATGATCAGGCATGGAGAGCAGAGTTTGGAGCAATCTATCAAGAGCATCATTATTAGTTGTTGGATTGATTAGGAATTGAGCAGTTTGAGTTTGACAGCACACAGATCCTACTCGGATCACAGAGTATTCATTCATGCACCAATTTATAATATTCTTTGTAGTGTTTTAAAATTCTTTGTATTTTTTATGCTGTGCGGGAACACTTGGTGGTTTATGGAACTTCAATTCTTTTGTCTGCTTGTGCTGACAGTA

Protein Sequence

>Glyur000092s00007543.1
MSTSSSIRNLLPRSISFKQKSTSNPKFPNPDAENTPPADPNIPINHHHQSAKQSHSKTPISTTTHLTQSKPPLESDPSVKAIRIRPTNNNGILGDRTVKXVSSDTLCVGDRQFTFDSVFDSKSSQEDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKXYTMWGPPSAIFEERSSQSHKGIVPRIFQMLFSELEKEQHMSEGKQFNYQCRCCFLEIYNEQIGDLLDPTQRNLEMXDDSKHALYIENLTEEYVTSYDEVTQILIKGLSSRKVGATSLNSKSSRSHIXFTFVIESWCKGTSSNGFSSSKTSRISLIDLAGQDRNKIDGAGRQCLRETKNVKKSLSQLGRLVDALTKETCSGKAKEIPNRNSCLTRLLHESLGGNAKLSVICSISPDDKNNGETLRTLRFGQRVRSIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVHSSDGNKNGYFQVRNVRESINQLRVSLNRSLLLPNIDNDADEEVNVDEEDIRQLRQQIDEFYSSCELNPKDISVSEDCVQYYSVEESCDADMTSGDEIEKEEVCSGETLSKLCHEDSVASANTLYASADDLVCTANTSRAIKSTFRDSISVSSCCRSSILEEPQLSESPKIRNIQRKSVAFSSSCLGSQNNVAEDNSSSSKDLLGQSFKKEELMRSSLRSSKVFPGPTESLAASLQRGLQIIDHHQRNSALNKSSASFSFQXLALGDSCDGTMQLKKYSIDERTASLLCDSCRKKVSDQDSCELQGSLKSRSDTAQAENLNGLTDKDVENTMAKASIREKELENVCKEQAARIDELNQLVEKLKGEKELNSITVYGQDSNKQPGHGEEHSNSLKDECKLLRGTSSASHLEEKCEIKEIQEELNQRTSSFDATEKEELLKKIQSLRSKLQLYGDAPVKMSTDKLRSSLISRSIQLRKSGVFSHDNGGEELEKERERWTEMESEWICLTDELRVDLEANXQRAERVEMELRLEKKCTEELDDALKRSVLGHARMVEHYVDLQEKYNDLVAKHNAIMHGIAEVKKAAAKAGKRGRARFAKSLAAELSALRVEREREAKSLKKENTSLKIQLRDTAEAVHAAGELLVRLREAEHAASIAEENFTKVQQDNEKLKRQXDKLKRKHKMEMITMKQYLAESKLPESALQPLFREDSDVVHNNATPHPDDDQAWRAEFGAIYQEHHY

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	311980	317541	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007543.1	PF00225.18	Kinesin	99	414	1.90E-90
Glyur000092s00007543.1	PF06548.6	Kinesin-related	676	1146	5.80E-160

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.056
SRR1783600	control	2.058
SRR1783602	moderate drought stress	1.359
SRR1811619	moderate drought stress	1.354

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.891
DRR006520	Root Summer glycyrrhizin high producing strain	4.694
DRR006521	Root Winter glycyrrhizin high producing strain	0.296
DRR006522	Root Winter glycyrrhizin high producing strain	0.289
DRR006523	Root Summer glycyrrhizin low producing strain	1.198
DRR006524	Root Summer glycyrrhizin low producing strain	1.147
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.062
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.029

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.693
SRR2868004	Drought Stress (root)	6.571
SRR2967015	Control (root)	8.687

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.585
SRR9715740	Leaf	0.095
SRR9715741	Leaf	0.630
SRR9715739	Root	0.158
SRR9715742	Root	0.740
SRR9715743	Root	0.918

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.387
SRR8749028	MeJA induced 9h	8.283
SRR8749029	MeJA induced 9h	5.615
SRR8749030	Uninduced	0.551
SRR8749031	Uninduced	0.255
SRR8749032	Uninduced	0.664

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.803
SRR8400027	Control - Root	17.860