Gene detail information of Glyur000092s00007542 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55530.3 | 2.00E-107 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_004491455.1 | 0 | PREDICTED: uncharacterized protein LOC101494649 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1M6K2|I1M6K2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G02030.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 302893 | 304209 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007542.1 | PF00168.25 | C2 | 56 | 139 | 2.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 106.764 |
| SRR1783600 | control | 106.530 |
| SRR1783602 | moderate drought stress | 93.011 |
| SRR1811619 | moderate drought stress | 94.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 149.678 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 148.580 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.501 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 53.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 137.308 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 137.665 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.966 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 141.059 |
| SRR2868004 | Drought Stress (root) | 180.880 |
| SRR2967015 | Control (root) | 234.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.307 |
| SRR9715740 | Leaf | 62.544 |
| SRR9715741 | Leaf | 78.050 |
| SRR9715739 | Root | 120.483 |
| SRR9715742 | Root | 151.199 |
| SRR9715743 | Root | 145.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.918 |
| SRR8749028 | MeJA induced 9h | 57.704 |
| SRR8749029 | MeJA induced 9h | 52.035 |
| SRR8749030 | Uninduced | 37.602 |
| SRR8749031 | Uninduced | 17.526 |
| SRR8749032 | Uninduced | 21.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 217.591 |
| SRR8400027 | Control - Root | 189.107 |