Gene detail

Gene detail information of Glyur000092s00007540.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G55560.1	9.00E-139	Protein kinase superfamily protein
NR	XP_003544713.1	0	PREDICTED: probable serine/threonine-protein kinase WNK11-like [Glycine max]
COG	YP_003797667.1	1.00E-23	putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprot	tr\|Q6ICW6\|WNK11_ARATH	6.00E-179	Probable serine/threonine-protein kinase WNK11
trEMBL	tr\|I1M6J6\|I1M6J6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G02000.1}

Sequence

Transcript Sequence

>Glyur000092s00007540.1
TTTTCAGGTGTTGGAGCTTCTTCTCTTTTCCGCCGAAAGTTTAAGGCTTTCATCTTCTGCACTTCTGGGGTCAAGCAATCGGTTTTCTTCATNATGCCGAGTGTTAACCCTGACCCCAAAGATTCGGAGCCATTCGTGGAAACCGATCCGAGTGGCCGCTACGGTCGATATAGTGAGCTACTTGGATGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGGATAGAGGTGGCATGGAACCAAGTGAAGCTAAGGAACTTCTCTGATGACCCTGCAATGGTAGATAGGCTTTACTCTGAAGTGAGGTTGCTGAGAAGCTTGACCAACAAAAACATCATTGCNCTTTACAGTGTGTGGAGGGATGACCAACGTGGCACCTTGAATTTCATCACTGAGGTATGTACCAGTGGGAATTTGAGGGAGTACAGGAAAAAACACAGGCATGTTTCCATGAAGGCACTGAAGAAGTGGTCTAAGCAGATCTTGAAAGGGTTGAATTATATGCACACTCATGAGCCCTGCATCATCCATAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGAAATGTTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGGAAGAACCATATCGCGCACTCGATTCTCGGTACACCGGAATTCATGGCTCCGGAGTTGTACGACGAGGACTACACAGAGTTGGTGGACATATACTCGTTTGGGATGTGCGTGTTGGAGATGGTGACACTAGAGATTCCTTACAGTGAGTGTGACAATGTTGCCAAGATATACAGGAAGGTGTCTTCTGGGGTGAGACCTGCAGCCTTGAACAACAAGGTCAAAGATCCAGAGGTAAAGGCCTTCATTGAGAAGTGCCTTGCTCAACCAAGAGCTAGACCTTCTGCTGCTGAGCTTCTCAGAGATCCTTTCTTTGATGAGCTTATTGATGATGATGACGAAAATGATGATTAATGATTATGCATTTATGCTAGCTGGTTGTTGGTTCATACATGCTAAAATATAGTCCTTTTATGTGATGAAATATGTTGATGATGTGTTTAGGTTTTTTTTTNNAAAAAAAATTGATTTATTTCTTTTTTTTTAGTTTATATGTCAAATTGCAAATTGGGGCAGGGTAGGCCCTGTGATTTGTTTTGATTGATTTTTTTCNCCTTTGTTCGGCTGTTAAATTGGATAAGGCTGAATATGGGTAAAGATATGGCAGCCTGGTGGTGAGGGCTTAATTGGGGATGGTGTCATTTTGTGTACATAGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	292015	294507	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007540.1	PF00069.20	Pkinase	27	283	5.10E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.893
SRR1783600	control	2.889
SRR1783602	moderate drought stress	7.464
SRR1811619	moderate drought stress	7.404

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.072
DRR006520	Root Summer glycyrrhizin high producing strain	9.706
DRR006521	Root Winter glycyrrhizin high producing strain	3.883
DRR006522	Root Winter glycyrrhizin high producing strain	3.553
DRR006523	Root Summer glycyrrhizin low producing strain	19.784
DRR006524	Root Summer glycyrrhizin low producing strain	20.172
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.487
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.744

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	86.807
SRR2868004	Drought Stress (root)	127.058
SRR2967015	Control (root)	167.889

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.439
SRR9715740	Leaf	9.518
SRR9715741	Leaf	12.695
SRR9715739	Root	33.644
SRR9715742	Root	21.584
SRR9715743	Root	23.380

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	39.113
SRR8749028	MeJA induced 9h	46.036
SRR8749029	MeJA induced 9h	66.632
SRR8749030	Uninduced	112.711
SRR8749031	Uninduced	215.936
SRR8749032	Uninduced	118.434

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	35.028
SRR8400027	Control - Root	39.549