Gene detail

Gene detail information of Glyur000092s00007537.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G26640.2	3.00E-34	WRKY family transcription factor family protein
NR	XP_003519618.1	1.01E-100	PREDICTED: probable WRKY transcription factor 20-like isoform X1 [Glycine max]
Swissprot	tr\|Q93WV0\|WRK20_ARATH	3.00E-38	Probable WRKY transcription factor 20
trEMBL	tr\|I1JJG7\|I1JJG7_SOYBN	4.00E-101	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G46690.1}

Sequence

Transcript Sequence

>Glyur000092s00007537.2
GTGAGTTTCTGAGAAGTAACAAAAAAAGCTCAGAAAAAAAGGGTTTAAAATGACGCAGAACAAAAACAGAACAGAACAGAGTCTCTCACACATGATTGAGTTATAATAAGAGAGAGAGAGAGATCCAATGTTGCAAGTCAACTGAGTCCTACTCTCTCAGCATCTCTGACAGAACCTTCAAAAACACACACACACACAAAAACACAATACCAAGACCCAGAGAAAGAAAGGGAAAAAAAAATGGCTGCTTTGAAATGACATTTATGCCCTTCCCTGTTTCCCTTTGAATCTCGGCAACGCCACCGTCACAATGGACGCCGCCGGCGAACCCCACTCNAGTTCGAAGCACCGGGTCGAGGGGTCACCGGAGGATCCGAATCGAACCGGGGCGGGGCACACTTCGACGGCGAGGTACAAGCTTATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACAATACCTCCGGGGCTGAGTCCGACGTCGTTTTTAGAGTCCCCAGTTCTTCTTTCCAACATGAAGGTGGAGCCTTCACCGACTACAGGGTCCCTTCCTAAGCTTCACCAAACAGTACACAGTTCTATGACTTCTACTGCNTCTGCTACATTTCCAGTAACCACTGCATGCTTCAATACCAACTTCAACAACCACGTAAGTGAACAATCTACTCAAGTAGAAGATCCAGGAAAAGGTCAATCATTTGCATCCTCACCATTAATCGAAAGTGAGAGAGCAGTTCCATCTAATGAATTAAGCTTATCATCACCTGGTCAAATGGTTAGTTCTGGGGCTAACAAAGCATCCAATATGTATGGTCAGGACAGTACCCCAGAGCTATCACCTGGAGCAACAAATGATGATAATATAGAGGGTGCTGGATTTGTGTCAAACAGGACAAATGACGAGATTGATGATGATGATCCCTTCTCAAAGCGAAGGAGTTATTACAAATGCACAAATGTTGGTTGCCCGGTTCGAAAACACGTGGAGAGGGCATCTCATGATCNGAAAGCAGTAATAACCACATATGAGGGCAAGCACAATCACGACGTACCGGCTGCAAGGAGCAGTAGCCATGACATGGNAGGACCATCAGCAGCTTCAGGTTCACATACAAGGATTAAGTTAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGACTTAGTTCAAATAGATCAAATGGGCAAGGGAAAATGCTGCTCTCTGAATATGGGGACAGTCAAACTCACACNAGCAGCAGCAATTCCAGTTTCAAGTTTGTGAATCACACTACTAACCCCTCAGCTCCTGTATACTATGGTGTTCTAAGTAACGGCTNGAATCCGTATGGTACTTCTAGAGAAAATAGTAGGAGTGATGGTCGTCCATCTNTAAACCATTCCTCATATCCTTGCTCACAGAACATGGGAAGAATACTAATGGGTCCATGAAAATTGGTTACACTACAAAAAAAAAAAAGTTAAGATAAATATTATGAGTAGCATTTTGCTTTCTTCTTTTTTGGCGGGTATATAGCTTCAAAAGGTAAAAAAAAAAATCTCATTTTCTGTAAGGAAATGCAGANAGTTCTTTTATGTTTATATTATATATCAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	275494	280062	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007537.2	PF03106.10	WRKY	211	249	5.60E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.558
SRR1783600	control	11.908
SRR1783602	moderate drought stress	10.410
SRR1811619	moderate drought stress	10.006

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.184
DRR006520	Root Summer glycyrrhizin high producing strain	18.218
DRR006521	Root Winter glycyrrhizin high producing strain	4.313
DRR006522	Root Winter glycyrrhizin high producing strain	4.304
DRR006523	Root Summer glycyrrhizin low producing strain	16.766
DRR006524	Root Summer glycyrrhizin low producing strain	16.421
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.264
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.138

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.729
SRR2868004	Drought Stress (root)	15.593
SRR2967015	Control (root)	16.679

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.645
SRR9715740	Leaf	8.818
SRR9715741	Leaf	8.903
SRR9715739	Root	2.061
SRR9715742	Root	10.568
SRR9715743	Root	9.471

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.847
SRR8749028	MeJA induced 9h	7.986
SRR8749029	MeJA induced 9h	7.343
SRR8749030	Uninduced	2.817
SRR8749031	Uninduced	1.895
SRR8749032	Uninduced	2.326

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.220
SRR8400027	Control - Root	22.550