Gene detail information of Glyur000092s00007535 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54630.1 | 1.00E-24 | zinc finger protein-related |
| NR | XP_003617696.1 | 4.33E-149 | hypothetical protein MTR_5g094440 [Medicago truncatula] |
| trEMBL | tr|G7K4D9|G7K4D9_MEDTR | 2.00E-149 | Nucleic acid-binding protein {ECO:0000313|EMBL:AET00655.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 269762 | 273413 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.133 |
| SRR1783600 | control | 10.160 |
| SRR1783602 | moderate drought stress | 14.993 |
| SRR1811619 | moderate drought stress | 15.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.661 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.458 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.375 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.186 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.564 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.523 |
| SRR2868004 | Drought Stress (root) | 50.372 |
| SRR2967015 | Control (root) | 36.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.835 |
| SRR9715740 | Leaf | 24.728 |
| SRR9715741 | Leaf | 37.806 |
| SRR9715739 | Root | 3.056 |
| SRR9715742 | Root | 10.778 |
| SRR9715743 | Root | 9.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.130 |
| SRR8749028 | MeJA induced 9h | 15.397 |
| SRR8749029 | MeJA induced 9h | 14.421 |
| SRR8749030 | Uninduced | 17.085 |
| SRR8749031 | Uninduced | 32.944 |
| SRR8749032 | Uninduced | 14.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.986 |
| SRR8400027 | Control - Root | 18.616 |