Gene detail

Gene detail information of Glyur000092s00007528

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26300.1	3.00E-65	cytochrome P450, family 71, subfamily B, polypeptide 34
NR	AET00662.2	2.30E-173	cytochrome P450 family 71 protein [Medicago truncatula]
COG	YP_723227.1	9.00E-07	cytochrome P450 [Trichodesmium erythraeum IMS101]
Swissprot	tr\|O48923\|C71DA_SOYBN	4.00E-163	Cytochrome P450 71D10
trEMBL	tr\|G7K4E6\|G7K4E6_MEDTR	9.00E-174	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AET00662.2}

Sequence

Transcript Sequence

>Glyur000092s00007528.1
GCGCATTCCTCTGGTTCCTCCTTAATCTACTGCATCATGGAACTTCACAGCCCTTTCTCTATTTCCTTCATCGCCTCCTTNCTCTTCCTCTTCATGCTATTCAAATTAGTTATTAAAAGGTCGAGTTCTAACAGTTTACCACCAGGACCATGGNCACTACCTCTCATAGGAAACATACCCCAGATTATTGTTGGTTCCTCAATGCCCCATCACAGCTTCAGAAACTTGGCAGAAAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCAAACATCATAGTCACTTCACCAGAGATAGCCAAAGAAATCATGAAAACACACGACCTCAACTTCTGTGATAGGCCAAACCTTGTTCTGTCCACAATACTCTCTTACAATGCCACAGACATAGCCTTCTCTCCATATGAGCTACTAAGTGCAAAGCGTGTACAATCATTCAGGTCCATAAGAGAAGAAGAGGTGTCAAAACTAGTCAACACATTGATGATATCTGCAAGTGAAGAAGGATCATCATGTTCTGTTGTTAATCTCACTCAGATGATTTTCTCATTGACTTATGGGACAACGGCGCGTGCGGCTTTTGGGAAAACAAATGGAAAAAACCAACAAGTGTTCATATCAACAATGGAGGAAAAATTGAAATTGTTGGGAGGGTTCTGTTTTGCTGATTTCTATCCTTCTATTGGGATGCTTAGAAGGGTGAGTTTGGCGAGGGTTAAATTCGAGAAGCTGCAGAGTGTGGCTGATGGGATATTGCAAGATATTCTTGATGATCACAAAGGGAGAAAAGGGTGTCACCGGGAAGCAGGGGAGCATGAAGATCTTGTTGATGTTCTTCTCAGGTTTCAAGAGGGAAATGACTCGCAATCTCTCTTGACCGATGACAATATCAAAGCAGTCATTAAGAACCGTTTGTCTCTGTCAAACATTATTGGCAAATTCTATGGGGTTGTGTTATGGGGGATGTCTGAAATGGTAAAGAACCCAAAGGTGATGGAAGAAGCACAAGCAGAGTTCCAAGAGAGAGTAAAGAGAGATGCCAAATCAATGGGTATGAGATACCAGCTAAGGCCAGGGTCACTATCAATGCTTGGGCTATTGGAAGAGATCAAAGCCGAGAGTTTCAAGCCCGAGAGATTCCTTAATAGCCCAATTGATTTCAGAGGAAAGGACTTTGAATACATACCATTTGGTGCTGGAAGGAGAATGTGCCCTGGCATTGCATTTGCCTTACCCAACATTGAGCTGCCACTTGCACACCTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAGTGAAGAACTTGACATGACTGAGTCGTTTGGGTTTACTCTAAGAAGAAAACATGACCTATGCCTCATTCCTACTATTGCTCGTCCTCCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	218505	221857	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B34

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007528.1	PF00067.17	p450	35	339	2.40E-23
Glyur000092s00007528.1	PF00067.17	p450	361	440	3.40E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.486
SRR1783600	control	3.454
SRR1783602	moderate drought stress	0.027
SRR1811619	moderate drought stress	0.027

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.077
DRR006520	Root Summer glycyrrhizin high producing strain	0.076
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.276
DRR006524	Root Summer glycyrrhizin low producing strain	0.237
DRR006525	Leaf Summer glycyrrhizin high producing strain	150.938
DRR006526	Leaf Summer glycyrrhizin high producing strain	152.559

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.547
SRR2868004	Drought Stress (root)	0.845
SRR2967015	Control (root)	0.783

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	34.621
SRR9715740	Leaf	57.912
SRR9715741	Leaf	42.458
SRR9715739	Root	0.000
SRR9715742	Root	0.144
SRR9715743	Root	0.216

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.016
SRR8749028	MeJA induced 9h	0.100
SRR8749029	MeJA induced 9h	0.239
SRR8749030	Uninduced	0.080
SRR8749031	Uninduced	0.168
SRR8749032	Uninduced	0.272

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.482
SRR8400027	Control - Root	0.308