Gene detail information of Glyur000092s00007508 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13175.1 | 2.00E-08 | |
| NR | XP_003617805.1 | 3.23E-42 | hypothetical protein MTR_5g095660 [Medicago truncatula] |
| trEMBL | tr|G7K4P8|G7K4P8_MEDTR | 1.00E-42 | Uncharacterized protein {ECO:0000313|EMBL:AFK34935.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 141887 | 142171 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 189.981 |
| SRR1783600 | control | 189.693 |
| SRR1783602 | moderate drought stress | 206.677 |
| SRR1811619 | moderate drought stress | 204.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 169.565 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 167.357 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.598 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.627 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 145.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 138.277 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.488 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 55.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.334 |
| SRR2868004 | Drought Stress (root) | 21.214 |
| SRR2967015 | Control (root) | 36.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.998 |
| SRR9715740 | Leaf | 35.797 |
| SRR9715741 | Leaf | 39.018 |
| SRR9715739 | Root | 46.298 |
| SRR9715742 | Root | 70.311 |
| SRR9715743 | Root | 70.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.458 |
| SRR8749028 | MeJA induced 9h | 11.198 |
| SRR8749029 | MeJA induced 9h | 22.691 |
| SRR8749030 | Uninduced | 3.203 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 85.762 |
| SRR8400027 | Control - Root | 79.963 |