Gene detail information of Glyur000092s00007505 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04480.1 | 3.00E-04 | |
| NR | XP_003617810.1 | 1.18E-55 | hypothetical protein MTR_5g095710 [Medicago truncatula] |
| trEMBL | tr|G7K4Q3|G7K4Q3_MEDTR | 4.00E-56 | Transmembrane protein, putative {ECO:0000313|EMBL:AET00769.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 128505 | 129122 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.717 |
| SRR1783600 | control | 6.485 |
| SRR1783602 | moderate drought stress | 2.057 |
| SRR1811619 | moderate drought stress | 3.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.578 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.361 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.564 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.532 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.498 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.451 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.950 |
| SRR2868004 | Drought Stress (root) | 2.686 |
| SRR2967015 | Control (root) | 2.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.336 |
| SRR9715740 | Leaf | 0.099 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.172 |
| SRR9715742 | Root | 0.236 |
| SRR9715743 | Root | 0.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.107 |
| SRR8400027 | Control - Root | 6.416 |