Gene detail information of Glyur000092s00007501 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55710.1 | 5.00E-64 | |
| NR | XP_003617815.1 | 1.12E-120 | Ycf60-like protein [Medicago truncatula] |
| Swissprot | tr|Q9FM67|TI205_ARATH | 3.00E-88 | Protein TIC 20-v, chloroplastic (Precursor) |
| trEMBL | tr|G7KEF3|G7KEF3_MEDTR | 4.00E-121 | TIC protein 20-V, putative {ECO:0000313|EMBL:AET00774.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 109864 | 110526 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.115 |
| SRR1783600 | control | 43.998 |
| SRR1783602 | moderate drought stress | 31.509 |
| SRR1811619 | moderate drought stress | 31.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.538 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.390 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.136 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 79.482 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.512 |
| SRR2868004 | Drought Stress (root) | 10.360 |
| SRR2967015 | Control (root) | 14.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.251 |
| SRR9715740 | Leaf | 31.814 |
| SRR9715741 | Leaf | 24.005 |
| SRR9715739 | Root | 12.718 |
| SRR9715742 | Root | 11.600 |
| SRR9715743 | Root | 11.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.920 |
| SRR8749028 | MeJA induced 9h | 4.959 |
| SRR8749029 | MeJA induced 9h | 6.100 |
| SRR8749030 | Uninduced | 5.519 |
| SRR8749031 | Uninduced | 0.898 |
| SRR8749032 | Uninduced | 2.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.802 |
| SRR8400027 | Control - Root | 14.767 |