Gene detail information of Glyur000092s00007500 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006576129.1 | 7.40E-30 | PREDICTED: leucine-rich repeat extensin-like protein 3-like [Glycine max] |
| trEMBL | tr|K7KBM6|K7KBM6_SOYBN | 3.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G46991.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 105920 | 106743 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 807.346 |
| SRR1783600 | control | 802.781 |
| SRR1783602 | moderate drought stress | 904.538 |
| SRR1811619 | moderate drought stress | 885.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1428.386 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1389.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 378.221 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 377.120 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 569.525 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 580.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.946 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.802 |
| SRR2868004 | Drought Stress (root) | 55.192 |
| SRR2967015 | Control (root) | 46.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.518 |
| SRR9715740 | Leaf | 2.381 |
| SRR9715741 | Leaf | 5.564 |
| SRR9715739 | Root | 464.165 |
| SRR9715742 | Root | 260.950 |
| SRR9715743 | Root | 280.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.672 |
| SRR8749028 | MeJA induced 9h | 6.024 |
| SRR8749029 | MeJA induced 9h | 5.166 |
| SRR8749030 | Uninduced | 0.823 |
| SRR8749031 | Uninduced | 0.574 |
| SRR8749032 | Uninduced | 2.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 386.124 |
| SRR8400027 | Control - Root | 292.657 |