Gene detail

Gene detail information of Glyur000092s00007494.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G55830.1	9.00E-178	Concanavalin A-like lectin protein kinase family protein
NR	XP_004491661.1	0	PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Cicer arietinum]
COG	YP_004571825.1	9.00E-21	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|Q9FHG4\|LRKS7_ARATH	0	Probable L-type lectin-domain containing receptor kinase S.7 (Precursor)
trEMBL	tr\|G7KEH2\|G7KEH2_MEDTR	0	Lectin receptor kinase {ECO:0000313\|EMBL:AET00793.1}

Sequence

Transcript Sequence

>Glyur000092s00007494.1
ATGCATCACCATCACCACCACAAAACAACCTTCTTTTTCTTTTTCTTCTTCTTGTCGCTGTTCTTGGAGGCCATCGCGGTGGCCGCCGGTAACGTTGCTTTCGAGTTCCCATATTTCACCACCACAGACAACAACAACAGCAACAGCAACAGCAGCATAACACTAGTGGGCGATTCCTACATAAGGAACGGCGTCGTTGGGCTAACAACAGCATCACCAACNCCCACGTGGAGCACGGGAGCATTGTTGTACACGCGCCCAATCANCCTCTTCGACCCACAAACCAACACCACCTTTTCTTTCTCAACAACCTTCTCCTTCTCCATAACCAACACCGCCAACCCCACTTCCTTCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACAACAACAACAACCTAACCGCCTCCCCCGCAATCCACGCCGCATCCCTCGGTCTCCCCACCAACAACTTCGTGGCGGTTGAGTTCGACACACGCATGGACCCTACACTTAACGACCCAAACGAGAATCACGTCGGCGTCGACGTGGACTCNCTCAACTCAATCCACACGGTGGACCCCATCTCACACGGCATCGACCTCAAGAGNGGAAACACCATAACCGCTTGGATCGATTACAAGACCGAGCGAAACACGCTCCACTTGTTCTTGAGTTACTCACACCGCTCCAAGCCCTTGGAGCCTGTCCTCACTCTCCCCATTGATCTTTCGCAATACTTCAAATTCAATTCCTTCATCTACGTTGGGTTCTCTGCTTCAACACAGGGTAGCACCGAGCTTCACCAAATCGAAACNTGGAGTTTCAAAACCATTGAGTCGTTACACTCTCACAACGTCTCTGATAACTCCGTAAATGTTAATGCAAATTCGAATGGAAATGTAAACAACATTCACGGGTCGGGTTCGGGCTCTGCTTCGAAGAAGCGTCGTCGAGTTGGGATTGGTGTGGCTGTTGCGGGTCCTGTTTTTCTCTTTGTGGTGTTTTCGGTGTTGATGGGGTTTTTAGTTTATGCTCGGAGAGTGAAAGGGGTCAGGAAAGGGAGAAACTTTGATAACACTCCTGGGTTTGTTAAGTGTCCCAGGGAGTTTGATTACAGAGAGTTGAAGTCTGCAACAAGAGAGTTTCATCCTAGTAGAATCGTTGGCCATGGTTCGTTTGGGACGGTTTATAAGGCCTTCTTTATCTCTTCTGGAACCATTGCTGCTGTTAAGAGGTCGAGGCATTCCCATGAAGGGAAGACTGAGTTTCTCTCTGAATTGTCCATTATAGCTGGTTTGAGACACAAGAATTTGGTTCAGCTTCAGGGTTGGTGTGTTGAGAAAGGAGAGTTGCTTCTGGTGTATGATTTCATGCCCAATGGGAGTTTAGATAAGATGCTTTACAAGGAGCCAGANAGGGGTAAGTTGTTGAATTGGCCTGTAAGGGTTAATATCGTTGTTGGGTTGGCTTCTGTGTTGGTTTATCTTCACCAGGAGTGTGAGCAGAGGGTGATTCATAGGGACATTAAGACAGGGAANGTGTTGCTGGATGGGAATTTGAACCCTAGGTTGGGTGATTTTGGATTGGCNAAGCTAATGGATCATGATAAGAGTCCTGTTTCGACTTTGACAGCTGGNACAATGGGGTACCTTGCACCNGAGTATCTTCANTATGGGAAGGCTACTGATAAGACTGATGTTTTCAGCTATGGGGTTGTTGTGCTTGAGGTGGCNTGTGGGAANAGNCCCATTGAGAGGGAAGGTACAAAGATGGTTAATTTGGTGGATTGGGTTTGGGGATTGTATTCTGAAGGGAAGGTGATTGAGGCTGTTGATAAGAGGCTTGATGGGGAGTTTGAGGAGGAGGAGATGAAGAAGATGTTGCTTTTGGGGTTGAGCTGTGCTAACCCGGATAGTGCTGAGAGACCCACCATGAGGAGGGTTCTTCAGATTCTCAACAATGAGGCTGCTCCTCTTGTTGTGCCNAAGGTGAAGCCAAGCCTTACCTTCTCATCTGACTTGCCTTTGACTATTGATGAGATTGTTTCTGATGCTGAAGAGTTCAACACCAGCCAGTCCATGTGTGAGATCAAGATTCACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	83840	85924	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.11.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007494.1	PF00139.14	Lectin_legB	34	270	1.40E-53
Glyur000092s00007494.1	PF00069.20	Pkinase	379	644	2.20E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.088
SRR1783600	control	0.088
SRR1783602	moderate drought stress	0.362
SRR1811619	moderate drought stress	0.377

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.822
DRR006520	Root Summer glycyrrhizin high producing strain	2.676
DRR006521	Root Winter glycyrrhizin high producing strain	0.321
DRR006522	Root Winter glycyrrhizin high producing strain	0.209
DRR006523	Root Summer glycyrrhizin low producing strain	0.953
DRR006524	Root Summer glycyrrhizin low producing strain	1.061
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.668
SRR2868004	Drought Stress (root)	0.419
SRR2967015	Control (root)	1.100

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.282
SRR9715740	Leaf	0.061
SRR9715741	Leaf	0.138
SRR9715739	Root	0.444
SRR9715742	Root	0.291
SRR9715743	Root	0.145

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.205
SRR8749028	MeJA induced 9h	1.130
SRR8749029	MeJA induced 9h	0.082
SRR8749030	Uninduced	0.092
SRR8749031	Uninduced	0.037
SRR8749032	Uninduced	0.055

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.290
SRR8400027	Control - Root	0.477