Gene detail information of Glyur000092s00007493 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49310.1 | 3.00E-06 | |
| NR | NP_001240049.1 | 5.72E-27 | uncharacterized protein LOC100787789 precursor [Glycine max] |
| trEMBL | tr|C6TB48|C6TB48_SOYBN | 2.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G01550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 81104 | 83081 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007493.1 | PF10950.3 | DUF2775 | 24 | 79 | 3.20E-06 |
| Glyur000092s00007493.1 | PF10950.3 | DUF2775 | 111 | 192 | 1.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.108 |
| SRR1783600 | control | 0.055 |
| SRR1783602 | moderate drought stress | 0.229 |
| SRR1811619 | moderate drought stress | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.091 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.328 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.332 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.288 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.061 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.734 |
| SRR2868004 | Drought Stress (root) | 0.259 |
| SRR2967015 | Control (root) | 0.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.097 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.022 |
| SRR8749028 | MeJA induced 9h | 12.465 |
| SRR8749029 | MeJA induced 9h | 8.072 |
| SRR8749030 | Uninduced | 7.429 |
| SRR8749031 | Uninduced | 2.248 |
| SRR8749032 | Uninduced | 1.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.108 |
| SRR8400027 | Control - Root | 0.470 |