Gene detail information of Glyur000092s00007486 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55860.1 | 2.00E-104 | Plant protein of unknown function (DUF827) |
| NR | XP_003551426.1 | 0 | PREDICTED: WEB family protein At5g55860-like [Glycine max] |
| Swissprot | tr|Q9LVQ4|Y5586_ARATH | 0 | WEB family protein At5g55860 |
| trEMBL | tr|I1N092|I1N092_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G08390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 49696 | 52489 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007486.1 | PF05701.6 | WEMBL | 27 | 548 | 1.60E-157 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.094 |
| SRR1783600 | control | 4.008 |
| SRR1783602 | moderate drought stress | 3.101 |
| SRR1811619 | moderate drought stress | 3.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.590 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.574 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.208 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.213 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.616 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.950 |
| SRR2868004 | Drought Stress (root) | 4.488 |
| SRR2967015 | Control (root) | 4.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.825 |
| SRR9715740 | Leaf | 1.886 |
| SRR9715741 | Leaf | 2.687 |
| SRR9715739 | Root | 0.621 |
| SRR9715742 | Root | 2.863 |
| SRR9715743 | Root | 2.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.776 |
| SRR8749028 | MeJA induced 9h | 5.810 |
| SRR8749029 | MeJA induced 9h | 4.731 |
| SRR8749030 | Uninduced | 0.833 |
| SRR8749031 | Uninduced | 0.601 |
| SRR8749032 | Uninduced | 0.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.042 |
| SRR8400027 | Control - Root | 6.049 |