Gene detail information of Glyur000092s00007485 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26620.1 | 4.00E-143 | Sucrase/ferredoxin-like family protein |
| NR | XP_004491521.1 | 0 | PREDICTED: uncharacterized protein LOC101488492 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7KEI3|G7KEI3_MEDTR | 0 | Sucrase/ferredoxin family protein {ECO:0000313|EMBL:AET00804.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 45236 | 48234 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007485.1 | PF06999.7 | Suc_Fer-like | 74 | 299 | 1.80E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.483 |
| SRR1783600 | control | 7.827 |
| SRR1783602 | moderate drought stress | 11.713 |
| SRR1811619 | moderate drought stress | 11.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.619 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.914 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.275 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.883 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.052 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.391 |
| SRR2868004 | Drought Stress (root) | 32.211 |
| SRR2967015 | Control (root) | 35.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.594 |
| SRR9715740 | Leaf | 22.698 |
| SRR9715741 | Leaf | 21.614 |
| SRR9715739 | Root | 19.479 |
| SRR9715742 | Root | 31.593 |
| SRR9715743 | Root | 28.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.493 |
| SRR8749028 | MeJA induced 9h | 16.242 |
| SRR8749029 | MeJA induced 9h | 13.010 |
| SRR8749030 | Uninduced | 6.375 |
| SRR8749031 | Uninduced | 1.393 |
| SRR8749032 | Uninduced | 2.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.722 |
| SRR8400027 | Control - Root | 24.767 |