Gene detail information of Glyur000091s00010522 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01710.2 | 7.00E-18 | TPX2 (targeting protein for Xklp2) protein family |
| NR | XP_006579689.1 | 0 | PREDICTED: probable serine/threonine-protein kinase nek3-like isoform X1 [Glycine max] |
| Swissprot | tr|Q84ZT9|WVD2_ARATH | 2.00E-09 | Protein WAVE-DAMPENED 2 |
| trEMBL | tr|K7KNC7|K7KNC7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G06371.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00091 | 109051 | 112988 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000091s00010522.1 | PF06886.6 | TPX2 | 370 | 411 | 1.70E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.610 |
| SRR1783600 | control | 4.575 |
| SRR1783602 | moderate drought stress | 2.899 |
| SRR1811619 | moderate drought stress | 2.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.406 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.048 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.035 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.700 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.644 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.163 |
| SRR2868004 | Drought Stress (root) | 3.936 |
| SRR2967015 | Control (root) | 5.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.469 |
| SRR9715740 | Leaf | 1.342 |
| SRR9715741 | Leaf | 1.374 |
| SRR9715739 | Root | 0.231 |
| SRR9715742 | Root | 1.013 |
| SRR9715743 | Root | 0.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.253 |
| SRR8749028 | MeJA induced 9h | 8.876 |
| SRR8749029 | MeJA induced 9h | 6.431 |
| SRR8749030 | Uninduced | 0.129 |
| SRR8749031 | Uninduced | 0.663 |
| SRR8749032 | Uninduced | 0.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.042 |
| SRR8400027 | Control - Root | 8.470 |