Gene detail information of Glyur000091s00010516 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40640.1 | 2.00E-113 | |
| NR | KEH25385.1 | 0 | transmembrane protein, putative [Medicago truncatula] |
| Swissprot | tr|Q8GUM4|Y3739_ARATH | 3.00E-150 | Uncharacterized membrane protein At3g27390 |
| trEMBL | tr|A0A072UHY7|A0A072UHY7_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH25385.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00091 | 69624 | 74335 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.852 |
| SRR1783600 | control | 0.868 |
| SRR1783602 | moderate drought stress | 2.367 |
| SRR1811619 | moderate drought stress | 2.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.949 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.375 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.320 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.692 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.604 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.425 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.712 |
| SRR2868004 | Drought Stress (root) | 19.493 |
| SRR2967015 | Control (root) | 19.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.877 |
| SRR9715740 | Leaf | 15.124 |
| SRR9715741 | Leaf | 2.216 |
| SRR9715739 | Root | 0.121 |
| SRR9715742 | Root | 0.349 |
| SRR9715743 | Root | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.047 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.040 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.875 |
| SRR8400027 | Control - Root | 1.625 |