Gene detail

Gene detail information of Glyur000090s00011426

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G72250.2	0	Di-glucose binding protein with Kinesin motor domain
NR	KHN26791.1	0	Kinesin-4 [Glycine soja]
Swissprot	tr\|O81635\|ATK4_ARATH	4.00E-100	Kinesin-4
trEMBL	tr\|I1KU77\|I1KU77_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000090s00011426.1
ATGGAGGATAACGAATGGGATCTCCATAACCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAACAAAAAATCTCTTCCACTACTCACTGCTCCAACCGGGTTTCACAAACATCACTGAGTTCTCCGAGTTCAGCTATGGCGGCAGATCCTCAATCTCGTGGAGACAGCCCAAGTCACGGATTCTCCCGGGAAAATGGAAGCTTTGAAAGGAACAGCGTGCAATTCGATGACCCAGTTGTGAAAAATGTGCTTGATGGAAGATCAATATTAGGGTATTCTCTGACTTCCCCAGATTTGGTNATCTGTGCTGGCTCACCAGATATTGCTGGAATCAGCTATGTTGACTCTCCTGAAATGTTGAAGAGCAAATATTGCAACAATTTGGAGTCATCTATGGAGCTTTCTCTAGAGAATGGAATCAATGGATCTGAAGTTGAAGTTCACAATGGCCATAAGACCCCAACTGTTAAATTCTCCAATTTGTGTCAAACCTTTGAACAAGAGGAAGAGCTACTATCACCTGAAGCCTCCTTCGAGCTTCTTCCACCGCGGGTAACCAATGATGAGTCACCNCAAGACTACCCTCCTAGAGGTAATGAAATGTTAGAAGATGCTGGAGTGTTTCAAGAGGCAGAATTGGAGTCCTCAGAAGATGCTGAGGATATTGGGGTAGAAGAGAAGTTTCAGAAGCTGAAAAGAGATTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGGGAGCTCAAGAGGATGAATGAACAGAAGAGTAGAGAATGTCAACAAGCTTGTAACTCCTTAAAAGAGCTTCAAAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTAGCATTTGCCATTGAGGGTCAAGTGAAAGAGAAAAGCAAGTGGTTTTCATCACTGAGAGACTTGATGAGGAAATTGAAGATTATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCATACAAGAAATATGAAGCATATATAAGTGAATTGGGGCTTATCATCAAGTCTAAAATGAATGAACAACTGGAGTCACATGAAGATCTCAAGTTCAAATATATGGAAGGGGCTAAGGAACGGAAAGATCTTTACAATAAGGTATTGGAGCTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAATGCCGAAGAGATAAAAGCAGGAGCCACAATGGCCTTAGATTTTGATGCTGCTAAAGATGGTGATCTTACTGTAATGTCAAATGGAGCTCCAAGAAAGACTTTCAAGTTTGATGCTGTCTTTGGCCCNCAAGCTGAGCAAGCTGAGATTTTCGAAGACACCGCACCAGTTGCAACTTCTGTTCTAGATGGGTACAATGTATGCATTTTTGCATATGGACAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGAGGAGTTAATTTCCGGACCCTTGAGAAAATGTTTGACATAATCGAGGAAAGACAGAACCTCTATCGCTACGATATCTCTGTAAGTGTCTTGGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTTCAGGAAATCAGCCAGGAATGGCTGCAAGAAGATTGGAAATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAACATGACTGAAGTGTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCCAACGAGCACAGCAGCCGATCGCACTGCATTCACTGTGTCATGGGAGAAAATTTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGTGAGCGAGTCGCAAAGACAGAAGTCCAAGGTGATAGGTTGAAGGAGACACAAAATATTAATAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACTAAAAGTTCACACGTCCCTTTCAGGAACTCCAAGCTCACACACTTGCTGCAAGACTCTTTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGCGAGACGATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGGGGAATAGAATTGGGCCCTGCGAAGAAGCAGTTGGACACTATTGAATTTCTGAAACACAAACAGATGAATGAGAAAACTAAACAAGAGCTAAAGCTGAAGGATTGCCGAATCAANATGATGGAGGAAACAATCAATGGACTAGAGTTCAAGATGAAGGAAAGAGATAACAAAAACAAAAATCTTCAAGACAAGGTAAAGGAATTGGAATCACAACTTATGATTGAGAGAAAGCTAGCACGTCAACATGTGGACTCAAAGATAGCTGAGCAGCATCAAATGAAACACCAAGAGGAGCAAAGCAATGCACTCATGAGACCAGCACTAGCAAATAGACCACTAGGAAGTCTCAAGAATTTCAATGACCCAGCTAATGGTGCATGGTGCAAAGACCAACCAAATCCAGCTAGACCCTTAATGGAGAACAACAACATCTTGAAACCTTATAATATACCCTTTTCCACCATGGAGAGCTCCACCAAGTACATTGATCAAGCTGAGAAAGAAAACAACCCTGACATGATGGCNGATACTAATAATAATAAAGCAGCACTACTACTTCCAAAAAGGACAGGAAGAGCTTCTATCTGCACAATGACACCGCGGGTTCCTTCAGCCACGGCTTCAAGGCGCAACTCTCTGATTCCACTCCCAAGCGTACCTAGCTTGACACAGCTCCAATCACCATTCCTACCCAAGTTAACAAGCCAAGCTGATCAGATTAAAGATGTCAATAATGGGGAATCAGAAACAAGCTGTTTGCCAGCACAGACTCATTGTGAGAGTCCCAAAGAAGTAAGAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCCTACATAAGAGAGTACAAGTGAAGTCTCCACTACAACAACACATGATGAGAAAGGTTGGTGTAAATGTGGGGATGGAGAAAGTGAGAGTTTCCATTGGAAGTAGGGGGAGATTGGCACAAAGGGTGCAAGTGGGAAGTGGTAGAAGAGGTGGTGGAGCTGCTAAAGAGATCCAACAAAAGAATAGCCAAAAGGAAAAGGAAAGGGGATGGATATGA

Protein Sequence

>Glyur000090s00011426.1
MEDNEWDLHNHDPLLLTDVSLQQKISSTTHCSNRVSQTSLSSPSSAMAADPQSRGDSPSHGFSRENGSFERNSVQFDDPVVKNVLDGRSILGYSLTSPDLVICAGSPDIAGISYVDSPEMLKSKYCNNLESSMELSLENGINGSEVEVHNGHKTPTVKFSNLCQTFEQEEELLSPEASFELLPPRVTNDESPQDYPPRGNEMLEDAGVFQEAELESSEDAEDIGVEEKFQKLKRDFECQRKELAETRRELGELKRMNEQKSRECQQACNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLMRKLKIMKMEHIKLLEEAEAYKKYEAYISELGLIIKSKMNEQLESHEDLKFKYMEGAKERKDLYNKVLELRGNIRVFCRCRPLNAEEIKAGATMALDFDAAKDGDLTVMSNGAPRKTFKFDAVFGPQAEQAEIFEDTAPVATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIEERQNLYRYDISVSVLEVYNEQIRDLLVSGNQPGMAARRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHVPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQLDTIEFLKHKQMNEKTKQELKLKDCRIXMMEETINGLEFKMKERDNKNKNLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQSNALMRPALANRPLGSLKNFNDPANGAWCKDQPNPARPLMENNNILKPYNIPFSTMESSTKYIDQAEKENNPDMMADTNNNKAALLLPKRTGRASICTMTPRVPSATASRRNSLIPLPSVPSLTQLQSPFLPKLTSQADQIKDVNNGESETSCLPAQTHCESPKEVRSGVKKIGSILRRSLHKRVQVKSPLQQHMMRKVGVNVGMEKVRVSIGSRGRLAQRVQVGSGRRGGGAAKEIQQKNSQKEKERGWI

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00090	315889	320786	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000090s00011426.1	PF00225.18	Kinesin	388	706	4.20E-107

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.588
SRR1783600	control	1.595
SRR1783602	moderate drought stress	0.895
SRR1811619	moderate drought stress	0.882

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.527
DRR006520	Root Summer glycyrrhizin high producing strain	2.264
DRR006521	Root Winter glycyrrhizin high producing strain	0.105
DRR006522	Root Winter glycyrrhizin high producing strain	0.102
DRR006523	Root Summer glycyrrhizin low producing strain	0.827
DRR006524	Root Summer glycyrrhizin low producing strain	0.903
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.660
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.673

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.193
SRR2868004	Drought Stress (root)	4.117
SRR2967015	Control (root)	5.557

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.751
SRR9715740	Leaf	0.092
SRR9715741	Leaf	0.510
SRR9715739	Root	0.016
SRR9715742	Root	0.415
SRR9715743	Root	0.532

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.468
SRR8749028	MeJA induced 9h	3.554
SRR8749029	MeJA induced 9h	1.618
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.048
SRR8749032	Uninduced	0.125

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.633
SRR8400027	Control - Root	6.659