Gene detail information of Glyur000090s00011421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_010674013.1 | 1.05E-26 | PREDICTED: uncharacterized protein LOC104890289 [Beta vulgaris subsp. vulgaris] |
| trEMBL | tr|A0A061ET65|A0A061ET65_THECC | 5.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:EOY08210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 287701 | 289475 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011421.1 | PF03372.18 | Exo_endo_phos | 230 | 337 | 1.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.865 |
| SRR1783600 | control | 6.728 |
| SRR1783602 | moderate drought stress | 11.325 |
| SRR1811619 | moderate drought stress | 11.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.863 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.044 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.592 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.739 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.938 |
| SRR2868004 | Drought Stress (root) | 6.479 |
| SRR2967015 | Control (root) | 7.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.736 |
| SRR9715740 | Leaf | 0.502 |
| SRR9715741 | Leaf | 1.171 |
| SRR9715739 | Root | 0.926 |
| SRR9715742 | Root | 2.089 |
| SRR9715743 | Root | 2.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.432 |
| SRR8749028 | MeJA induced 9h | 2.283 |
| SRR8749029 | MeJA induced 9h | 0.417 |
| SRR8749030 | Uninduced | 0.332 |
| SRR8749031 | Uninduced | 0.464 |
| SRR8749032 | Uninduced | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.160 |
| SRR8400027 | Control - Root | 12.034 |