Gene detail information of Glyur000090s00011419 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79030.1 | 0 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003546782.1 | 0 | PREDICTED: uncharacterized protein LOC100779992 [Glycine max] |
| COG | YP_005270304.1 | 2.00E-10 | chaperone protein DnaJ2 [Acetobacterium woodii DSM 1030] |
| Swissprot | tr|Q6XL73|DNJ39_ARATH | 3.00E-08 | Chaperone protein dnaJ 39 |
| trEMBL | tr|K7MDW1|K7MDW1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G40410.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 272116 | 277111 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011419.1 | PF00226.26 | DnaJ | 345 | 409 | 4.00E-19 |
| Glyur000090s00011419.1 | PF14901.1 | Jiv90 | 440 | 526 | 1.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.307 |
| SRR1783600 | control | 12.429 |
| SRR1783602 | moderate drought stress | 9.331 |
| SRR1811619 | moderate drought stress | 9.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.475 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.610 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.740 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.130 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.078 |
| SRR2868004 | Drought Stress (root) | 30.769 |
| SRR2967015 | Control (root) | 33.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.123 |
| SRR9715740 | Leaf | 5.921 |
| SRR9715741 | Leaf | 6.416 |
| SRR9715739 | Root | 3.638 |
| SRR9715742 | Root | 11.768 |
| SRR9715743 | Root | 12.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.049 |
| SRR8749028 | MeJA induced 9h | 21.431 |
| SRR8749029 | MeJA induced 9h | 12.126 |
| SRR8749030 | Uninduced | 9.630 |
| SRR8749031 | Uninduced | 7.051 |
| SRR8749032 | Uninduced | 7.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.775 |
| SRR8400027 | Control - Root | 28.667 |