Gene detail information of Glyur000090s00011415 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G56000.1 | 7.00E-138 | FAD/NAD(P)-binding oxidoreductase family protein |
| NR | KHN26798.1 | 0 | hypothetical protein glysoja_011390 [Glycine soja] |
| COG | YP_005371607.1 | 2.00E-41 | FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259] |
| trEMBL | tr|I1KU65|I1KU65_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G18500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 249570 | 255638 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011415.1 | PF13450.1 | NAD_binding_8 | 10 | 79 | 1.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.801 |
| SRR1783600 | control | 7.812 |
| SRR1783602 | moderate drought stress | 5.848 |
| SRR1811619 | moderate drought stress | 5.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.477 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.497 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.358 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.373 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.127 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.233 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.109 |
| SRR2868004 | Drought Stress (root) | 19.668 |
| SRR2967015 | Control (root) | 19.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.850 |
| SRR9715740 | Leaf | 12.066 |
| SRR9715741 | Leaf | 13.002 |
| SRR9715739 | Root | 9.403 |
| SRR9715742 | Root | 9.062 |
| SRR9715743 | Root | 7.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.185 |
| SRR8749028 | MeJA induced 9h | 4.923 |
| SRR8749029 | MeJA induced 9h | 3.993 |
| SRR8749030 | Uninduced | 3.129 |
| SRR8749031 | Uninduced | 1.240 |
| SRR8749032 | Uninduced | 2.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.439 |
| SRR8400027 | Control - Root | 25.692 |