Gene detail information of Glyur000090s00011400 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 120478 | 124577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011400.1 | PF05162.8 | Ribosomal_L41 | 195 | 215 | 1.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.559 |
| SRR1783600 | control | 15.073 |
| SRR1783602 | moderate drought stress | 16.628 |
| SRR1811619 | moderate drought stress | 15.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.370 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.639 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.130 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.918 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.386 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.029 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.969 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 108.849 |
| SRR2868004 | Drought Stress (root) | 88.582 |
| SRR2967015 | Control (root) | 80.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.126 |
| SRR9715740 | Leaf | 59.950 |
| SRR9715741 | Leaf | 54.037 |
| SRR9715739 | Root | 47.114 |
| SRR9715742 | Root | 30.352 |
| SRR9715743 | Root | 31.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.738 |
| SRR8749028 | MeJA induced 9h | 31.794 |
| SRR8749029 | MeJA induced 9h | 48.813 |
| SRR8749030 | Uninduced | 22.617 |
| SRR8749031 | Uninduced | 12.873 |
| SRR8749032 | Uninduced | 20.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 103.531 |
| SRR8400027 | Control - Root | 104.835 |