Gene detail

Gene detail information of Glyur000090s00011394

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G04390.1	1.00E-100	BTB/POZ domain-containing protein
NR	XP_004488836.1	0	PREDICTED: BTB/POZ domain-containing protein At1g04390-like isoform X1 [Cicer arietinum]
Swissprot	tr\|P93820\|Y1439_ARATH	0	BTB/POZ domain-containing protein At1g04390
trEMBL	tr\|A0A072VJP6\|A0A072VJP6_MEDTR	0	BTB/POZ domain protein {ECO:0000313\|EMBL:KEH38345.1}

Sequence

Transcript Sequence

>Glyur000090s00011394.1
CGGTGTTCAAACAAAACTTGCAGAGCTGAAACTTAGCTTCTCCTCTTCTGTTCTGCACTGCACAACACGATATATATAAATAATAATAATATTCTCAACTTAGACAGTTGCAGCAGTTGTATCAATCTATTCATTCATTTTGAGGCATGAAATCTAGCAGCAGAGAGAAAGAAAGCATCATCAGTTCGCACGTGCACACCCTCCATCGCCGTCTCCTCCACGCGTTAAACCTTGGCTCCAGACATTTTGATGAGAAGACAAATAGATGGAAGTGGCAGTGCGCCAACATTGAAGTTCAGAAAAATGTTCTGCGATCCATGAATGCATTCCTTGATTCTATATCACCACCAGATGCACGTGCCGCTCGCCACACCATCCTTAAGGAATCTGTTGCTGATGTTTTGGGAGCATTGTTATGGATTCTTCAATGCAAAAATGGAGCTTTGTTAAGCATGGCGTCAAATGTGGCAGTGAAGTTAGTTAGTGTATTACCAAATCCACTATTGCAATCGCATATATTGGATCTTGTCTATTGTCTATCGTCCTTGCTATCTTCGCATCAAGTTGAGGTTGCAATTCCCTGTGCTACTGCTTTGAATTTGGTAATCTCAAATTTGAGTGCTGCAAGTGAAAAGGCAGTTGTTGAAGCACTGAAAGAAACAGAGATTTCCATTTGTATTGTTGGAAATATAAAAGATTTTGCTGGAGGTGCAAAGAAAAATGAATATTTTGTAGAGATGGCTTCACTTTTGAGCACAATACTGTTGCGCTTGCCTTCGTCTAGGTTCTCTATTTGTAATGATGTTGAATTTATGAAAGGTTTAGCAAACATGCATACAAGGACAGATACTTCTATTAAACTTGTTCTTCTAAAGCTCTACACATCTTTAGCTTTATGTGATTCTGTAGCTAAAAAACTTATAGAGGATGGGAAAGCATTTCTACAAATGGTTGTGCAGGCGATGGGAAAATCAAACCCTCATGATGTTCGGATAGAGGGGTTTCGGCTTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTTTAAAAGTGGTGGATTTGTGTGGTGAAGCTCTTGTTGATGCCATAATATGTGGGATGAAAGAAACAGGGCTGAGTTCCAAAAAAATTGGGAACAACCATGGTTCTCTATTAGCAGAAGCATGTCAGTTGGCTCTAATAACTCGTTGGGCTGGTGATCATCATATCAGGTTTTGGAAACAAAGAATTGATAAAGTCCTCCTTAATCTTCTGATTGAAAATATTCATGACCATTTGTCTGAACCTGTCTTGTCATTGGAAAAGCAAATATCCGTGGTGAAGGAAGGATTGAATGCTGATTATCATCTTAGCCTGAGGAGTTTTCTGTGGGACATTCTTGGGTGGCTTACAATTCATTGCAGAGAAAATCTAAACCCTTATACCCATGGAAGTGAGCTCCACATTAACTTACTAATTATATGTGCATGCTTGACTTTTGTGGATACAGTTCAAAAATGGTGCCGAATATGTCAAAAGGATGTTGATGATAATTTTCAAAGTGAACCTGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTACATTTCCTCACATGCTAGATTCGTGTTATCTGACATACTGAAGGTGAAAGGCATGCCATGCTTAAAAAACCTAATACGTACTCTAGACTATATATCATCCCTAGAAAGCTATGGTTCATATGATAAACTTCAACTTGTTATTAACTTAATCGGGTTAAATTGTCTTTCAAGTTTACCACAGTATCAAAGATGTATCATTGAAAGCAAAGGGATAAAGGCAGTTGTTCTTCTTGTGAAACGATGCCTAAGTAATCACATTCATGTAGGAAGGCCCGACATTGCTCCCCATTTGAATACTACATTCAATGAAAGGTCTTGTTGCTGGAATGGTAAAGGAGATTGGGAAGGTTCCAATGTTTTCCTATTTTATAGTTTGTGGGGCTTAGCTGAATTTCTTCATCAGTGTAGACAGGTGACAGACATTGAAACTCAATTAGTTAGCAAACTTCATGAGATCTGTACTAGGGCCTCTTTCAGTCCAGGGGTGAAATGGTATGTTTCTTATATTCTAAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTTGCCANGAGGATTGGGAAATCTCTTAATGAGGAAGAATACGCAGACTTGCGACTTATTGTAGCAAATGGGGATTCTCTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTTCTACCTCCTGAATTGTTATCTAATAGTAAGAGTTCTAAAGAAGTAACAGATGATTTTGTTGGAGAGACCACGAGAGAAGTTCGATTTTCTGCTCATGTTGATTATGAAGCACTTGTGTCGTTGTTGGAATATGTATATTTGGGATGCTTACACGCGGGAGAAGAAACAGTACAGAAGCTGAAAATTCTTGCTAAGCGTTGCAATCTACAGCCTCTCCTGCAAATGCTTTGTAGACAATGTCCAAAGTGGGGCACACCTTTTCCCAGCTTTGATCTTACTTCATCTCTAGATTCAGCTGGAAGTTGTTTTTCGTATGGTTTGCTTCTTAATCAGATTCTTCTAGATATCTTGAGATTGCATGTGATTGGTGTAATCATAGATGTCATATTGGAAGCTGAATCGAATAAGCTTGTTGGATGGACATGTAATGTTTGTTCTCACTCAGTACCACATTTGCATGTTCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTACAGGGTTTGTTCCGATCAGGAATGCAAGAGAGTCATTCACAAGTGATAAAGGTTGCTATTAGCTGGGAAGCATTGATTAAACTGGTACAGTGGTTTTATTCTGATGAGCTGCCAAATCCTCCCTCTGGATGCTTGTGGGTGAATATGGATGATGAAGAAAAGCTATTCGATCTGCAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATGTTGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCTTGTCTTGATTCTTCTAAGCAGTTGTCCGTTAAAATAATCAAAATGGCTTATAATCTCTCTTTGTGGAAGTTGGTTGACATCACTGCAAATCTCTTGGCTCCTACATATAGGCAATTACGAGATTCTGGTGAACTTGAAGAATTTGACGATGCGCTAGTTCATTTCATTTCTTCTGCTTCTGTTCAACTTAACCAAGAAGGCGAAAATCGCTTTAGGTGATTTAATATCCTCCTTGATGATTTGCAGTGCAGGATATTCAGGTAGAAGTAGAACGACTTAGGATCTCTATGTTCCACAGCTAATTGGATATGAAGCTAATCTTTCTTTGAGGGTAGTCCATATTGAATGGCTTCAGAGACAGCTATGCAGAATGCAGGCTGTGGTGCAAAAGGATAAAAGCTCTGACCTAGATTTTGCTATTGATATTTAGAGTTTGGTTGCACAATCATTGAAATGCTTACAGGGAAGCCTCCTTGGAGCGAATATGAAGGAGAATATGAAGGACTTGTGGATTCAGCGGACATGCTGCATGTATACAGGAACTTTGTTTCTTAACTTGATAAATTTCGTGTCAAATTATGCATGCTGCAGCCTTGTTCAAGATTCATGCGTTGATCAGATATTGATAAGAGATTTGAGTTTATAGTTTAATAAATCACACAAGCGTTGTGTGTGTGATGAAGCTCTCTTTCAGAATCAAAGAGAATCACCTCAAAAGCAAAGTCCATAATTGCAATTGTACTATTTCATGGAACTATCTTTTATGGAGAATTTGTCGCATATCCACCTCTTCTGGCCATACTTGATACAAAATGCTTCTTGATCTTTGTGAGATTGCCAAAGGCTTTGGAAGGAATGTGGTGAATGCAGGTTGGCGTGAAAGAATCATTTTCAACTCCTTGCTTGACCAATCCTCAACTTCCATCTCATGTCATAAGAAACGTATAGCATAAAGTCTCTGCCACCATGATTTTACAACTTAAAATACTTCGAATCAGCAAGTCCTAGTAGTCGATGCCATGCCATCTCTCCAGCTTCTCATTTTCTAGTCAACTTGCATAATTATCACAGTAGTTGTCAGCAGTAGAAAGCTTGTGACAGGTCTAAAAATCAAGTGTAAATATTTCATTTCTTCACAAAATAATCAGTGAGGTCTAAACAGAGGCATTTATTGCTTTGTTCTCCCCCCCCCCCCCCCCCCCCCCCCAAGTCAAGATTAGCCTTCGACTACTTAGGATGACATACGAGTTACCAAGTGCTTTTGCATTGCCTACCATGGCAGTTGTCTCAAAGCAATAAACGTACGGTATATTCAACACCAAAGACCAAAACGTTTGCAGTGTGGTTTTAAAATTTGCAAATTTGCTCTTGTTTGTAACAGTGTCTAT

Protein Sequence

>Glyur000090s00011394.1
MKSSSREKESIISSHVHTLHRRLLHALNLGSRHFDEKTNRWKWQCANIEVQKNVLRSMNAFLDSISPPDARAARHTILKESVADVLGALLWILQCKNGALLSMASNVAVKLVSVLPNPLLQSHILDLVYCLSSLLSSHQVEVAIPCATALNLVISNLSAASEKAVVEALKETEISICIVGNIKDFAGGAKKNEYFVEMASLLSTILLRLPSSRFSICNDVEFMKGLANMHTRTDTSIKLVLLKLYTSLALCDSVAKKLIEDGKAFLQMVVQAMGKSNPHDVRIEGFRLAQCLLRSQENCLKVVDLCGEALVDAIICGMKETGLSSKKIGNNHGSLLAEACQLALITRWAGDHHIRFWKQRIDKVLLNLLIENIHDHLSEPVLSLEKQISVVKEGLNADYHLSLRSFLWDILGWLTIHCRENLNPYTHGSELHINLLIICACLTFVDTVQKWCRICQKDVDDNFQSEPVSRAVLMMIYSPCNYISSHARFVLSDILKVKGMPCLKNLIRTLDYISSLESYGSYDKLQLVINLIGLNCLSSLPQYQRCIIESKGIKAVVLLVKRCLSNHIHVGRPDIAPHLNTTFNERSCCWNGKGDWEGSNVFLFYSLWGLAEFLHQCRQVTDIETQLVSKLHEICTRASFSPGVKWYVSYILSYFGFYGFPNEFAXRIGKSLNEEEYADLRLIVANGDSLSVHGVILAVRCPSLLPPELLSNSKSSKEVTDDFVGETTREVRFSAHVDYEALVSLLEYVYLGCLHAGEETVQKLKILAKRCNLQPLLQMLCRQCPKWGTPFPSFDLTSSLDSAGSCFSYGLLLNQILLDILRLHVIGVIIDVILEAESNKLVGWTCNVCSHSVPHLHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVAISWEALIKLVQWFYSDELPNPPSGCLWVNMDDEEKLFDLQPYVELCWLAEFWMLENIQEACWNVIMSCLDSSKQLSVKIIKMAYNLSLWKLVDITANLLAPTYRQLRDSGELEEFDDALVHFISSASVQLNQEGENRFR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00090	92118	100177	-

Gene family

Gene family	subfamily
Transcription Factors Family	TRAF
Ubiquitin Family	BTB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005488 binding

GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000090s00011394.1	PF00651.26	BTB	670	782	4.40E-05
Glyur000090s00011394.1	PF00651.26	BTB	855	918	1.70E-06
Glyur000090s00011394.2	PF00651.26	BTB	670	782	4.40E-05
Glyur000090s00011394.2	PF00651.26	BTB	855	918	1.70E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.466
SRR1783600	control	2.496
SRR1783602	moderate drought stress	3.755
SRR1811619	moderate drought stress	3.796

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.068
DRR006520	Root Summer glycyrrhizin high producing strain	3.009
DRR006521	Root Winter glycyrrhizin high producing strain	4.244
DRR006522	Root Winter glycyrrhizin high producing strain	4.229
DRR006523	Root Summer glycyrrhizin low producing strain	3.606
DRR006524	Root Summer glycyrrhizin low producing strain	3.412
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.692
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.726

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.259
SRR2868004	Drought Stress (root)	10.632
SRR2967015	Control (root)	10.624

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.216
SRR9715740	Leaf	4.158
SRR9715741	Leaf	3.196
SRR9715739	Root	0.306
SRR9715742	Root	3.436
SRR9715743	Root	2.769

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.135
SRR8749028	MeJA induced 9h	4.605
SRR8749029	MeJA induced 9h	1.883
SRR8749030	Uninduced	5.983
SRR8749031	Uninduced	4.135
SRR8749032	Uninduced	2.916

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.142
SRR8400027	Control - Root	7.776