Gene detail information of Glyur000090s00011385 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003546789.2 | 2.87E-16 | PREDICTED: CYSTM1 family protein A-like isoform X1 [Glycine max] |
| trEMBL | tr|K7MDY4|K7MDY4_SOYBN | 1.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G40761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 35970 | 37606 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.805 |
| SRR1783600 | control | 9.535 |
| SRR1783602 | moderate drought stress | 13.433 |
| SRR1811619 | moderate drought stress | 13.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 75.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 76.648 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 57.255 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.632 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 72.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.630 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 62.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.554 |
| SRR2868004 | Drought Stress (root) | 120.424 |
| SRR2967015 | Control (root) | 216.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 687.305 |
| SRR9715740 | Leaf | 356.425 |
| SRR9715741 | Leaf | 662.463 |
| SRR9715739 | Root | 150.910 |
| SRR9715742 | Root | 148.342 |
| SRR9715743 | Root | 134.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 245.271 |
| SRR8749028 | MeJA induced 9h | 449.945 |
| SRR8749029 | MeJA induced 9h | 379.975 |
| SRR8749030 | Uninduced | 623.773 |
| SRR8749031 | Uninduced | 439.772 |
| SRR8749032 | Uninduced | 480.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.295 |
| SRR8400027 | Control - Root | 87.691 |