Gene detail information of Glyur000090s00011384 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004488823.1 | 1.79E-22 | PREDICTED: CYSTM1 family protein A-like [Cicer arietinum] |
| trEMBL | tr|K7MDY4|K7MDY4_SOYBN | 6.00E-22 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G40761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 24974 | 26107 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011384.1 | PF12734.2 | CYSTM | 36 | 79 | 5.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 57.416 |
| SRR1783600 | control | 57.455 |
| SRR1783602 | moderate drought stress | 59.013 |
| SRR1811619 | moderate drought stress | 58.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.663 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.659 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.654 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.622 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 98.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 101.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 234.118 |
| SRR2868004 | Drought Stress (root) | 374.669 |
| SRR2967015 | Control (root) | 400.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 745.887 |
| SRR9715740 | Leaf | 714.560 |
| SRR9715741 | Leaf | 980.015 |
| SRR9715739 | Root | 176.451 |
| SRR9715742 | Root | 202.160 |
| SRR9715743 | Root | 200.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1141.493 |
| SRR8749028 | MeJA induced 9h | 2073.387 |
| SRR8749029 | MeJA induced 9h | 1848.541 |
| SRR8749030 | Uninduced | 5762.280 |
| SRR8749031 | Uninduced | 3567.444 |
| SRR8749032 | Uninduced | 4825.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 273.648 |
| SRR8400027 | Control - Root | 268.238 |