Gene detail

Gene detail information of Glyur000089s00008829

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G39050.1	0	Kinesin motor family protein
NR	XP_004500778.1	0	PREDICTED: kinesin-related protein 11-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	2.00E-79	Kinesin-like protein NACK1
trEMBL	tr\|I1JSK4\|I1JSK4_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000089s00008829.1
AAAGAAATTAAATTCAAACTCAAACCATCTCCATTCACTCGACCCCTCCCCCCACTGATCTTCTTCTTCATCACTGCAAGTTCCTCTGTCTTAAAGAAGACGAAACAATCTCTCTGTCTCTCAGTGTGCGTGTTTTAGTCCACCTNTCCCAGAGAATAATAATAATCTCAATATCCCAACCAAAGCATCGAAAACGAAACAACGAAGAAAAATTAAAAAGCGAAGAGAACCAAATTTTGCTCCCTTTTTTGTTTGTATAGCCATGTGAGAGTTCTGACACATTCTCTTCCCCTCCCTTCTTCTCCTCCGCTAGTTCGCTTTGTTCGTTTCCACTGAGTCACCAACTCGGTGAGTGAGTGGAGTGAACCGAACTCAATGGCGTCTTCCTCGCGAGCAAGGAGTAGCTCACCGTTTTCTCACCGTAAACCTTCGACTCCNTANTCTTCCACTTCCTCTTCTTCTTCCTTCATGAACGGAAGGTTAATGCCTCGCTCCTGCTCTTCCTCTACGTCGTCGTTTTTCAACTCCGGTGGCCGATCCGTGACTCCGAGTCGCGGTCGCAGCGAGTCAACGTATCACGGCCCGCGCGGTTACGACGGCCGTTCGCCGGTTGTGTTCGGGACGGAGGAGCTGATTGCGGANCCTGTNGATACGTCGAGGTCGGGGGATAGCATTTCGGTCACGATTCGGTTTCGACCATTGAGTGAAAGGGAGTATCAGAGAGGGGACGAGATCGCGTGGTATGCGGANGGAGACAAGATTGTCAGAAATGAGTATAATCCAGCTACTGCTTATGCATTTGATAGAGTTTTTGGACCACATACCAATTCGGATGAGGTGTATGAAGTAGCAGCCAAACCTGTGGTGAAGGCTGCCATGGAGGGCGTCAATGGAACTGTATTTGCTTATGGTGTGACGAGCAGTGGAAAGACACATACTATGCACGGTGATCAAAATTCTCCCGGTATAATACCACTAGCTATAAAGGATGTTTTCAGCATGATCCAAGATACCCCAGGAAGAGAATTNTTACTCCGAGTGTCATATCTGGAAATATACAATGAGGTGATAAATGATTTGCTTGACCCAACTGGTCAAAATTTGCGGGTTAGAGAAGATGCACAGGGGACTTATGTTGAGGGTATAAAGGAAGAAGTCGTTCTATCGCCTGGACATGCTCTTTCTTTTATTGCTGCTGGAGAAGAACATCGTCATGTTGGATCAAACAATTTTAATCTCTTTAGCAGCCGGAGTCACACGATATTTACACTGATGATAGAAAGCAGTGCCCATGGTGATGATTATGATGGAGTGATCTTCTCTCAGCTTAACTTGATTGATTTGGCTGGATCTGAAAGCTCAAAAACTGAAACAACTGGATTAAGAAGAAAAGAAGGATCTTACATCAACAAAAGTCTTCTGACACTTGGAACGGTTATAGGAAAATTGAGCGAGGGGAAGGCATCTCATGTCCCATATCGAGATTCAAAGCTAACCCGCCTCCTACAATCTTCTCTTAGTGGACATGGCCATGTTTCGCTTATATGCACAGTAACTCCAGCATCCAGTAATATGGAGGAAACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTAGAAATATATGCGTCCCGTAATAAGATCATTGATGAAAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTTCTCAAAATAGAACTTGATCAACTAAAGAGGGGGATGCTAGTTGGTGTCAGTCANGAGGAGATTATAACCTTAAAGCAGAAGTTGGAAGAAGGTCAAGTGAAAATGCAATCAAGATTGGAAGAAGAGGAAGAAGCCAAGGCTGCTCTTATGAGTAGGATTCAGAGGCTAACCAAACTCATTCTGGTTTCCTCAAAGAANGCAGTTCCTGGATATCTAACTGATGTTCCCAGTCACCAGCGAAGTCACTCTTTTGGCGAGGAAGAAGTGTTGATTGAAAATGAGAGTCAAACAGACGCTTCTGCAGTGTCATCACATCTGTTTCATGATGTTAGACATAAAAGATCGTCAAGTAGATGGAACGAAGAGTTCTCCCCAACTAGCAGTACTGTTACTGAATCAACACAGGCTGGTGAACTGATTAGCGGAACAAAACTAGCAGCGAGTGGGATGACAACGTCCGATCAAAAGGATCTTCTTGTTGAGCAAGTCAAGATGCTAGCTGGAGACATTGCTTTCAGTACCAGCACTCTGAAGCGGTTGATGGAACAGTCTGTAAATGACCCTGAGGGCTACAAAACTCAGATTGAGAACTTGGAACGTGAGATACAAGAAAAACGGAAGCAAATGAGGGTGTTAGAACAAAGATTAACTGAGACTGGTGAATCTTCGATGGCTAACTCATCGCTAGTTGAAATGCAGCAGACAGTCACAAGATTAATGACTCAGTGTAATGAAAAAGCCTTTGAGTTGGAGATAAAATCCGCAGACAACCGTGTCCTTCAGGAACAGCTAAATGATAAGTGTTCTGAAAACAGAGAGTTGCAAGAAAAGGTAAAGTTGCTGGAGCAGCAACTGGCAGCAGTTTCTAGTGGTACATCGATATTGTCTTCTGAACAATGTGCCTCCGGAGAACACATTGATGAGTTGAAAAAGAAAATACAATCCCAGGAAATCGAAAATGAAAAACTGAAGCTAGAGCAAGTTCACTTGTCAGAAGAGAATAGTGGGCTGCGTGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAATTGGCCTCTGCTGCTGCTATAGAACTGAAGAATTTGGCTGGGGAAGTAACAAAACTTTCATTGCAGAATGCGAAGTTGGAAAAAGAATTGATCGCTGCGCGAGACCTGGCCAACTCTCGTAGTGCTGTCGGGCAAACGGTTAATGGTGTTAACCGTAAGTACAATGAAGCAAGATCTGGGAGGAAGGGGAGGATTTCTAGTCGTGCTAATGAAATTTCGGGAGCTGGTCTAGATGACTTTGAGTCATGGAGTCTTGATGCTGATGATTTGAAGATGGAACTGCAGGCTAGGAAGCAACGAGAGGCAGCTCTTGAGGCTGCATTAGCTGAGAAGGAATTTGTGGAAGAGGAGTACAGGAAAAAGGCTGAAGAAGCCAAGAAAAGAGAAGAGGCCTTGGAGAACGATTTAGCAAATATGTGGGTCCTTGTTGCTAAGTTAAAAAAAGAAGGGGGAGCTGTCCCAGAATCGAACATTGATAAAAAAAATGATGGGGCGCAAAACATAAACGATCCAAAAGCTAATGACATTGAAAGTAATATTGTCTCTAAGGAGCAGCTTTCGGATGTATCAAAACCAGATGACGAAATCCCGAAGGAAGAACCCTTGGTTGTTCGCCTCAAGGCACGCATGCAAGAGATGAAGGAAAAAGAACTCAAGTACCTTGGGAATGGCGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTCCAACTGCAGCAATTCTTCTTCCATGCCGACATTTTTGTTTGTGTAAATCTTGTTCACTTGCTTGTTCTGAGTGTCCAATATGCCGCACAAATATTACAGATAGGCTATTTGCTTTTACATCTTGACCCTATCAACCGAGGGCTCTATCCCATTGAGNTCCATGCAATTACGGGTGTAATTCTTTTATTAGTTTGCCTGTATGTAAAACCGTTTAAAAGGTATACCAATATCTTCTTTCTTTTATACTACCCCTGGGGAACTGTATTATAGGGGAAGACAANGGGGTGAGGAGAAAGAATGTAAAAAGGGAAAGGGTGTAAACAGCACCGCTGAAGTACATAGCACAAAATGNATGTTTTACGTAATATACAGTCGAATTTTGTTGCGAACCTCTTATGACCTTTGCTGGGTATAAGAACAGTGAGGTTTCTCTTTGACCCTCTCCTGCTGCTCAGGNTTCGCATTTTCGTACCCATTATATTTGATGGGTGCAAATGCTACGGCGAGCAACGTCAATAGATGGCTCAATGTGGATAAGGAATTTTTACCATTTGTCATAGGATTTTTTGGTTTTTTTATGTTAGGGTTAGAAATTGTTCAAATATTGTAAGACCCATTTTGGTGATATCTCTTTTTTTTTTGGTCAACTTTTGGTGATATCTCTAGTAAATGCGGAATCAACACGAGGTGCTTGAGATTGCAATGAAGGCATTCCAAAGTGGCTCAATCTAGCTGAGCCCTAAAACCCATCTCACCGTTACTTTTCTTTTCCTTTGTGACTCAGTTAATTCATTTGTCCAATCCTTCTGGAACCTTTTAAAACTTTCATCGCAGTACCCCCACAAACCCTCTCTTGTCGTGTAACAACAACCCCCTCTACCAGAGAATTGCTCTCCCATCACTTTTCCTTGAGATATTGTCAAACTGTCTCTACTCATGAACCATCCAAATCTTTGACCCAAAAAAGAATGAACCATTGAACCATCCAAATCATGGAGCACTTTTTAGACCTTCACCTTTTCCTTCATACTATTGTGACTTTCCCTCGGTAGCCATCANAACCATCGAACCAGAATTTATTCCCATGAAA

Protein Sequence

>Glyur000089s00008829.1
MASSSRARSSSPFSHRKPSTPXSSTSSSSSFMNGRLMPRSCSSSTSSFFNSGGRSVTPSRGRSESTYHGPRGYDGRSPVVFGTEELIAXPVDTSRSGDSISVTIRFRPLSEREYQRGDEIAWYAXGDKIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSMIQDTPGREXLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGDDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKIELDQLKRGMLVGVSXEEIITLKQKLEEGQVKMQSRLEEEEEAKAALMSRIQRLTKLILVSSKXAVPGYLTDVPSHQRSHSFGEEEVLIENESQTDASAVSSHLFHDVRHKRSSSRWNEEFSPTSSTVTESTQAGELISGTKLAASGMTTSDQKDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPEGYKTQIENLEREIQEKRKQMRVLEQRLTETGESSMANSSLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNDKCSENRELQEKVKLLEQQLAAVSSGTSILSSEQCASGEHIDELKKKIQSQEIENEKLKLEQVHLSEENSGLRVQNQKLSEEASYAKELASAAAIELKNLAGEVTKLSLQNAKLEKELIAARDLANSRSAVGQTVNGVNRKYNEARSGRKGRISSRANEISGAGLDDFESWSLDADDLKMELQARKQREAALEAALAEKEFVEEEYRKKAEEAKKREEALENDLANMWVLVAKLKKEGGAVPESNIDKKNDGAQNINDPKANDIESNIVSKEQLSDVSKPDDEIPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESPTAAILLPCRHFCLCKSCSLACSECPICRTNITDRLFAFTS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00089	338207	348924	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0008017 microtubule binding

GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000089s00008829.1	PF00225.18	Kinesin	105	416	1.30E-103
Glyur000089s00008829.1	PF13920.1	zf-C3HC4_3	1023	1065	5.60E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.661
SRR1783600	control	8.667
SRR1783602	moderate drought stress	4.026
SRR1811619	moderate drought stress	4.163

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.781
DRR006520	Root Summer glycyrrhizin high producing strain	4.637
DRR006521	Root Winter glycyrrhizin high producing strain	0.400
DRR006522	Root Winter glycyrrhizin high producing strain	0.430
DRR006523	Root Summer glycyrrhizin low producing strain	2.182
DRR006524	Root Summer glycyrrhizin low producing strain	2.219
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.433
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.139

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.796
SRR2868004	Drought Stress (root)	15.174
SRR2967015	Control (root)	17.275

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.040
SRR9715740	Leaf	4.945
SRR9715741	Leaf	6.104
SRR9715739	Root	0.673
SRR9715742	Root	6.545
SRR9715743	Root	5.253

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.371
SRR8749028	MeJA induced 9h	20.956
SRR8749029	MeJA induced 9h	12.377
SRR8749030	Uninduced	11.763
SRR8749031	Uninduced	13.138
SRR8749032	Uninduced	4.122

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	24.633
SRR8400027	Control - Root	26.861