Gene detail information of Glyur000089s00008821 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16460.1 | 1.00E-62 | Protein of unknown function (DUF1640) |
| NR | XP_007135926.1 | 6.82E-94 | hypothetical protein PHAVU_009G003700g [Phaseolus vulgaris] |
| trEMBL | tr|V7ARH1|V7ARH1_PHAVU | 3.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW07920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 278339 | 281877 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000089s00008821.1 | PF07798.6 | DUF1640 | 53 | 168 | 2.00E-43 |
| Glyur000089s00008821.2 | PF07798.6 | DUF1640 | 53 | 154 | 3.30E-34 |
| Glyur000089s00008821.2 | PF07798.6 | DUF1640 | 151 | 192 | 1.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.226 |
| SRR1783600 | control | 4.188 |
| SRR1783602 | moderate drought stress | 4.144 |
| SRR1811619 | moderate drought stress | 3.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.501 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.626 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.749 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.416 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.660 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.899 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.364 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.973 |
| SRR2868004 | Drought Stress (root) | 12.735 |
| SRR2967015 | Control (root) | 9.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.193 |
| SRR9715740 | Leaf | 11.609 |
| SRR9715741 | Leaf | 10.141 |
| SRR9715739 | Root | 3.894 |
| SRR9715742 | Root | 6.433 |
| SRR9715743 | Root | 4.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.888 |
| SRR8749028 | MeJA induced 9h | 22.399 |
| SRR8749029 | MeJA induced 9h | 37.204 |
| SRR8749030 | Uninduced | 16.999 |
| SRR8749031 | Uninduced | 14.820 |
| SRR8749032 | Uninduced | 18.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.599 |
| SRR8400027 | Control - Root | 11.029 |