Gene detail information of Glyur000089s00008816 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51100.2 | 2.00E-15 | |
| NR | AFK33512.1 | 2.39E-43 | unknown [Lotus japonicus] |
| trEMBL | tr|I3RZS0|I3RZS0_LOTJA | 9.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:AFK33512.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 244997 | 248434 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.843 |
| SRR1783600 | control | 4.908 |
| SRR1783602 | moderate drought stress | 5.158 |
| SRR1811619 | moderate drought stress | 4.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.508 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.026 |
| SRR2868004 | Drought Stress (root) | 3.173 |
| SRR2967015 | Control (root) | 3.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.306 |
| SRR9715740 | Leaf | 2.976 |
| SRR9715741 | Leaf | 4.578 |
| SRR9715739 | Root | 1.471 |
| SRR9715742 | Root | 4.698 |
| SRR9715743 | Root | 2.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.078 |
| SRR8749028 | MeJA induced 9h | 11.675 |
| SRR8749029 | MeJA induced 9h | 13.585 |
| SRR8749030 | Uninduced | 2.714 |
| SRR8749031 | Uninduced | 1.430 |
| SRR8749032 | Uninduced | 2.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.240 |
| SRR8400027 | Control - Root | 10.317 |