Gene detail

Gene detail information of Glyur000089s00008812

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G21300.2	ATP binding microtubule motor family protein
NR	KHN33713.1	Centromere-associated protein E [Glycine soja]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	Kinesin-like protein NACK1
trEMBL	tr\|I1JSJ2\|I1JSJ2_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000089s00008812.1
CATGTTTTTTTTTTCAGATCGTGGGTCGTTAAAGTTATGCAGTGCCCAATTTCACTCTTCCACNTTTTTTTTATTCCCACTTCCTTTACTTTTCTCAATCCCATTGCCAAAAAAAATAAAGCTTCAACCTCTCCCTATTTTGATTCCGCTTAACAAACATCTCAACTTTGACGCCACTTCACAGTGAGAAATGGGGGCTATTGCTGGAGAAGAGGTAGTGAAATGGGAGAAGATGGAAGGAGTAAGTGGTGGCCGTGAAGAGAAGATTCTGGTGTTGGTAAGGCTTAGGCCTCTGAGTGAGAAGGAAACAGCTGTGAATGAAGTGGCAGATTGGGAATGCATCAATGACACTACCATCTTATACCGGAACACGCTTAGGGAAGGTTCCACATTTCCAAGTGCCTACACCTTTGACAGAGTATTTCGGGGTGACTCTTCCACCAAGCAGGTATATGAGGAAGGGGCCAAACAAATTGCTCTTTCAGCTGTTGGTGGAATTAACTCAAGTATTTTTGCGTACGGGCAAACAAGTAGTGGAAAGACATACACGATGAATGGAATAACTGAGTATGCTGTGACAGATATTTTTGACTATATAAACAAGCATGAAGAAAGAGCATTTGTATTGAAATTCTCAGCAATTGAAATTTACAATGAAGTTATTAGGGACCTCCTCAGCACTGAGAACACTCCACTAAGGCTGCGTGATGATCCTGAGAAAGGACCTATCATAGAGAAACTTACAGAGGAGATTTTACGGGACTGGGTGCATTTGAAAGAGCTCTTATCATTCTGTGAAGCACAAAGGCAAGTAGGAGAGACATACCTCAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGACTGACAATTGAAAGTTCCGCCAGAGAATTTTTGGGTAAAAGCAACTCAACCACACTAGCAGCTAGCGTGAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCTTCCCAGGCACTATCAGCTGGGTCCAGATTGAAAGAAGGTTGTCATATAAACCGGAGTTTACTCACTCTTGGAACAGTCATTCGTAAGCTTAGTAAGGGAAGACAAGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTCCTTAGGTGGCAATGCTAGAACAGCCATCATTTGCACTTTAAGCCCTGCGCGAAGCCATGTTGAGCAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCTAAAGAAGTGACTACTAAAGCACAGGTTAATGTGGTGATGTCTGACAAGGCCTTGGTCAAGCAGCTTCAGAAAGAGGTGGAGAGATTAGAGAGTGAGTTGAGAATTCCTTGTCCTCCTGCCACCAATTGCAATTATGCAGACATGTTGAGAAAGAAAGATCTCCAGATAGAAAAGACCTCGAATATTCAGATGGAGAAGGAGATTAGGGAGCTAATTAAGCAACGTGATCTTGCTCAATCTCGGCTTGAGGATTTGCTGCGCATTGTTGGAAACAATCACAAATCTAGAAAATCCGGCATTAGTAATTGTTCTAATTTGCAGGAAAGGGTAGATACCTGGGAAGATGACGGTTCAGTATCAGAGTCATCAAGCATTTATCGTCCTGATTTACGCTTTAAAGAATTCAATAATCCTCACTATAATGATGAAGACAGCAGAAAATACCCTGATGAATACTGCAAAGAAGTTCAGTGTGTTGAATTGGAGGAATCAAGTAGAGATGACCCGGAAAATCCTGATCCACCAGCAAGTGACAATGGGGTGTTGGCATTACCATTGCATGGAGAGGAAAATGCAATTAATCAGGAAATATCAACTCCTGATAGGGATCAGAGAATCNGCGATGCGCAATCGAGTACTGATTCTCTTGTATGTTCCTACCCTGATGAACAGTCTCTACAGGCTATGTCAAATTCTAGGAATCTTAAGTTAACAAGGAGCTGGAGTTTCTCAGGAGAAATGGAGAGGACTCCAGCCAATGGTTTTGAAAAATTGTTCCCCGGAAGACCTTATGGTTTGAGGAGAAAGCTCCTTCCGTTGACTTATGGTGCTTCCACAAAATTGTCAATGAATGGTTCTCCTTCTTCTGTTGGAAGTCCTTCTGTGGATGGGTTAAGAACCAACAGCACCCCANCAACTGCTAATGAGGATATTACTAGCATCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTAGAGTACCAGAATCAGCTTGCTGATGGTCAGGATCAGCNGACAGAGGTAAAACCTTTTATCAAGTTTGAGAAGAACATGAAAGATGTAGGTGTGGATCCAATGTTAGAGGCACCTGGAACTCCTTTAGAATGGCCACTGCAATTCAAGCAGCAGCAAAAAGAGATAGTTGAACTGTGGCAAGCCTGCAGTGTATCATTGTTCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGCGACCCAACAGACTCTATTTACATGGAGGTGGAGCTTAGAAGACTATCTTTCCTCAAAGAAACATTTCCCAATGGTCAATCAGGCACATTGACTTCAAGTGTAAAGGGTCTTCGAAGGGAGAGAGGGATGCTTGTGAATCTGATGCAGAAAAGGCTATCGGAGGGAGAGAGGGAAGATGTGTTCAACAAGTGGGGGATTGCATTGGATTCAAAGCGNAGGAGGATGCAGCTGGCGAACCGCTTATGGAGCAACACTGACATGAACCACGTCATGGAGAGTGCTGAAATTGTGGCTAAATTAGTGAGGTTTAACGAGCAGGGGAAGGGTAAGGTACTGAAGGAGATGTTTGGGCTTAGCTTCACTCCCCAGCACCAGCGCACATATTCCTGGAAAAATAGCAGGACGACTCTGTTTTAGGTCCTTCTTTGTGTTGTGCCCGCCGAGTGCATGTGATGCTAGTATATGATATAATATAATGTATTAACATACTGACCAAGGGACCTCCTCCAGACCG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00089	219792	225683	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000089s00008812.1	PF00225.18	Kinesin	31	347	5.00E-95
Glyur000089s00008812.1	PF11995.3	DUF3490	718	872	5.20E-65
Glyur000089s00008812.2	PF00225.18	Kinesin	31	347	5.00E-95
Glyur000089s00008812.2	PF11995.3	DUF3490	718	872	5.20E-65
Glyur000089s00008812.3	PF00225.18	Kinesin	31	347	5.00E-95
Glyur000089s00008812.3	PF11995.3	DUF3490	718	872	5.20E-65

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.241
SRR1783600	control	4.226
SRR1783602	moderate drought stress	3.473
SRR1811619	moderate drought stress	3.475

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.043
DRR006520	Root Summer glycyrrhizin high producing strain	8.999
DRR006521	Root Winter glycyrrhizin high producing strain	2.611
DRR006522	Root Winter glycyrrhizin high producing strain	2.499
DRR006523	Root Summer glycyrrhizin low producing strain	8.893
DRR006524	Root Summer glycyrrhizin low producing strain	8.850
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.672
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.294

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.022
SRR2868004	Drought Stress (root)	4.889
SRR2967015	Control (root)	5.153

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.318
SRR9715740	Leaf	7.756
SRR9715741	Leaf	4.477
SRR9715739	Root	0.687
SRR9715742	Root	3.759
SRR9715743	Root	3.416

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.084
SRR8749028	MeJA induced 9h	0.923
SRR8749029	MeJA induced 9h	0.649
SRR8749030	Uninduced	0.715
SRR8749031	Uninduced	0.166
SRR8749032	Uninduced	0.193

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.843
SRR8400027	Control - Root	10.991