Gene detail information of Glyur000089s00008782 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21180.1 | 1.00E-06 | |
| NR | NP_001240932.1 | 1.39E-60 | uncharacterized protein LOC100813444 [Glycine max] |
| trEMBL | tr|C6TCC8|C6TCC8_SOYBN | 5.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G02720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 79748 | 82892 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.532 |
| SRR1783600 | control | 2.439 |
| SRR1783602 | moderate drought stress | 3.979 |
| SRR1811619 | moderate drought stress | 4.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.127 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.397 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.185 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.355 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.340 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.782 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.497 |
| SRR2868004 | Drought Stress (root) | 39.041 |
| SRR2967015 | Control (root) | 48.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.719 |
| SRR9715740 | Leaf | 4.977 |
| SRR9715741 | Leaf | 4.422 |
| SRR9715739 | Root | 15.491 |
| SRR9715742 | Root | 11.819 |
| SRR9715743 | Root | 11.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.968 |
| SRR8749028 | MeJA induced 9h | 4.602 |
| SRR8749029 | MeJA induced 9h | 1.856 |
| SRR8749030 | Uninduced | 0.091 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.254 |
| SRR8400027 | Control - Root | 18.733 |