Gene detail information of Glyur000089s00008781 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDO44195.1 | 1.01E-28 | hypothetical protein CISIN_1g044100mg, partial [Citrus sinensis] |
| trEMBL | tr|A0A067DRM5|A0A067DRM5_CITSI | 4.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:KDO44195.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 77378 | 77671 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.353 |
| SRR1783600 | control | 9.125 |
| SRR1783602 | moderate drought stress | 3.896 |
| SRR1811619 | moderate drought stress | 3.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.455 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.797 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.482 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.064 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.737 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.456 |
| SRR2868004 | Drought Stress (root) | 28.857 |
| SRR2967015 | Control (root) | 28.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.481 |
| SRR9715740 | Leaf | 1.300 |
| SRR9715741 | Leaf | 1.464 |
| SRR9715739 | Root | 11.418 |
| SRR9715742 | Root | 11.737 |
| SRR9715743 | Root | 11.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.849 |
| SRR8400027 | Control - Root | 10.870 |