Gene detail information of Glyur000089s00008779 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001235223.1 | 4.27E-54 | uncharacterized protein LOC100500498 [Glycine max] |
| trEMBL | tr|C6T1X6|C6T1X6_SOYBN | 2.00E-54 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15598.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 72668 | 73405 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 160.884 |
| SRR1783600 | control | 171.499 |
| SRR1783602 | moderate drought stress | 150.461 |
| SRR1811619 | moderate drought stress | 160.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 119.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 114.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 407.687 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 353.929 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 110.738 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 113.435 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 197.898 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 197.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.825 |
| SRR2868004 | Drought Stress (root) | 51.873 |
| SRR2967015 | Control (root) | 44.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.520 |
| SRR9715740 | Leaf | 27.056 |
| SRR9715741 | Leaf | 27.716 |
| SRR9715739 | Root | 70.370 |
| SRR9715742 | Root | 65.671 |
| SRR9715743 | Root | 66.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.447 |
| SRR8749028 | MeJA induced 9h | 4.576 |
| SRR8749029 | MeJA induced 9h | 8.122 |
| SRR8749030 | Uninduced | 0.476 |
| SRR8749031 | Uninduced | 0.336 |
| SRR8749032 | Uninduced | 0.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.296 |
| SRR8400027 | Control - Root | 23.025 |