Gene detail information of Glyur000089s00008778 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16630.1 | 1.00E-39 | Pollen Ole e 1 allergen and extensin family protein |
| NR | KHN33685.1 | 6.73E-179 | hypothetical protein glysoja_013691 [Glycine soja] |
| trEMBL | tr|I1JSF5|I1JSF5_SOYBN | 8.00E-179 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G00680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 65732 | 67747 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000089s00008778.1 | PF01190.12 | Pollen_Ole_e_I | 28 | 102 | 1.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.592 |
| SRR1783600 | control | 0.606 |
| SRR1783602 | moderate drought stress | 0.420 |
| SRR1811619 | moderate drought stress | 0.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.173 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.256 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.263 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.263 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.552 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.676 |
| SRR2868004 | Drought Stress (root) | 1.475 |
| SRR2967015 | Control (root) | 1.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.606 |
| SRR9715740 | Leaf | 5.574 |
| SRR9715741 | Leaf | 6.810 |
| SRR9715739 | Root | 0.064 |
| SRR9715742 | Root | 1.784 |
| SRR9715743 | Root | 1.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.070 |
| SRR8749028 | MeJA induced 9h | 0.731 |
| SRR8749029 | MeJA induced 9h | 2.056 |
| SRR8749030 | Uninduced | 1.317 |
| SRR8749031 | Uninduced | 2.229 |
| SRR8749032 | Uninduced | 1.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.633 |
| SRR8400027 | Control - Root | 1.777 |