Gene detail information of Glyur000089s00008773 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38690.1 | 9.00E-146 | PLC-like phosphodiesterases superfamily protein |
| NR | KEH42029.1 | 0 | 1-phosphatidylinositol phosphodiesterase-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072VKS3|A0A072VKS3_MEDTR | 0 | 1-phosphatidylinositol phosphodiesterase-like protein {ECO:0000313|EMBL:KEH42033.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00089 | 32663 | 33616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000089s00008773.1 | PF00388.14 | PI-PLC-X | 62 | 172 | 4.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.853 |
| SRR1783600 | control | 33.229 |
| SRR1783602 | moderate drought stress | 38.943 |
| SRR1811619 | moderate drought stress | 39.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.828 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.748 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.447 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.858 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.191 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 87.507 |
| SRR2868004 | Drought Stress (root) | 86.928 |
| SRR2967015 | Control (root) | 70.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.181 |
| SRR9715740 | Leaf | 52.460 |
| SRR9715741 | Leaf | 40.841 |
| SRR9715739 | Root | 48.609 |
| SRR9715742 | Root | 54.106 |
| SRR9715743 | Root | 50.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.165 |
| SRR8749028 | MeJA induced 9h | 9.649 |
| SRR8749029 | MeJA induced 9h | 6.741 |
| SRR8749030 | Uninduced | 6.676 |
| SRR8749031 | Uninduced | 2.508 |
| SRR8749032 | Uninduced | 2.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.950 |
| SRR8400027 | Control - Root | 69.497 |