Gene detail information of Glyur000088s00007754 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13130.1 | 1.00E-06 | |
| NR | XP_007147627.1 | 2.96E-74 | hypothetical protein PHAVU_006G140600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BSS4|V7BSS4_PHAVU | 1.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:ESW19621.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 361652 | 362425 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000088s00007754.1 | PF05553.6 | DUF761 | 229 | 252 | 0.00039 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.370 |
| SRR1783600 | control | 0.427 |
| SRR1783602 | moderate drought stress | 16.750 |
| SRR1811619 | moderate drought stress | 17.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.300 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.098 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.505 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.422 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.285 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.284 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.439 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.231 |
| SRR2868004 | Drought Stress (root) | 0.393 |
| SRR2967015 | Control (root) | 0.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.986 |
| SRR9715740 | Leaf | 6.996 |
| SRR9715741 | Leaf | 2.472 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.400 |
| SRR9715743 | Root | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.142 |
| SRR8400027 | Control - Root | 0.027 |