Gene detail information of Glyur000088s00007751 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16400.1 | 2.00E-21 | |
| NR | KHN40803.1 | 1.66E-46 | hypothetical protein glysoja_015170 [Glycine soja] |
| trEMBL | tr|I1L024|I1L024_SOYBN | 6.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G01550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 347635 | 347931 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.027 |
| SRR1783600 | control | 5.880 |
| SRR1783602 | moderate drought stress | 10.051 |
| SRR1811619 | moderate drought stress | 5.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.598 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.094 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.382 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.326 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.077 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.363 |
| SRR2868004 | Drought Stress (root) | 4.364 |
| SRR2967015 | Control (root) | 4.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.823 |
| SRR9715740 | Leaf | 12.690 |
| SRR9715741 | Leaf | 10.736 |
| SRR9715739 | Root | 3.684 |
| SRR9715742 | Root | 4.896 |
| SRR9715743 | Root | 3.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.060 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.969 |
| SRR8400027 | Control - Root | 2.232 |