Gene detail information of Glyur000088s00007743 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16380.2 | 5.00E-20 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004486344.1 | 3.93E-66 | PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1-like [Cicer arietinum] |
| COG | YP_007547453.1 | 2.00E-09 | hypothetical protein WQG_3820 [Bibersteinia trehalosi USDA-ARS-USMARC-192] |
| trEMBL | tr|I1MFR5|I1MFR5_SOYBN | 3.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G12530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 313699 | 315701 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.530 |
| SRR1783600 | control | 48.496 |
| SRR1783602 | moderate drought stress | 88.506 |
| SRR1811619 | moderate drought stress | 91.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 69.347 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 213.781 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 210.283 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 137.320 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 138.764 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.425 |
| SRR2868004 | Drought Stress (root) | 61.967 |
| SRR2967015 | Control (root) | 46.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.518 |
| SRR9715740 | Leaf | 6.994 |
| SRR9715741 | Leaf | 11.005 |
| SRR9715739 | Root | 57.577 |
| SRR9715742 | Root | 79.640 |
| SRR9715743 | Root | 74.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 179.422 |
| SRR8749028 | MeJA induced 9h | 300.866 |
| SRR8749029 | MeJA induced 9h | 263.098 |
| SRR8749030 | Uninduced | 325.845 |
| SRR8749031 | Uninduced | 183.439 |
| SRR8749032 | Uninduced | 257.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 54.736 |
| SRR8400027 | Control - Root | 51.657 |