Gene detail information of Glyur000088s00007735 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12545.1 | 7.00E-11 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | NP_001266108.1 | 8.43E-19 | 14 kDa proline-rich protein DC2.15-like precursor [Cicer arietinum] |
| Swissprot | tr|Q9ZSP6|AIR1L_ARATH | 3.00E-17 | Putative lipid-binding protein AIR1B (Precursor) |
| trEMBL | tr|Q9LEN8|Q9LEN8_CICAR | 3.00E-19 | Putative 14-kDa proline-rich protein {ECO:0000313|EMBL:CAB96990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 271451 | 273107 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000088s00007735.1 | PF14547.1 | Hydrophob_seed | 9 | 54 | 9.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.691 |
| SRR1783600 | control | 0.321 |
| SRR1783602 | moderate drought stress | 0.278 |
| SRR1811619 | moderate drought stress | 0.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.546 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 272.275 |
| SRR2868004 | Drought Stress (root) | 111.567 |
| SRR2967015 | Control (root) | 68.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.049 |
| SRR9715739 | Root | 3.755 |
| SRR9715742 | Root | 0.477 |
| SRR9715743 | Root | 0.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.880 |
| SRR8400027 | Control - Root | 11.285 |