Gene detail information of Glyur000088s00007726 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47740.1 | 4.00E-25 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_004486362.1 | 1.09E-62 | PREDICTED: U-box domain-containing protein 35-like [Cicer arietinum] |
| trEMBL | tr|V7BRA2|V7BRA2_PHAVU | 1.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:ESW19575.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 201040 | 204392 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.168 |
| SRR1783600 | control | 0.189 |
| SRR1783602 | moderate drought stress | 0.148 |
| SRR1811619 | moderate drought stress | 0.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.507 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.321 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.901 |
| SRR2868004 | Drought Stress (root) | 9.639 |
| SRR2967015 | Control (root) | 6.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.543 |
| SRR9715740 | Leaf | 10.008 |
| SRR9715741 | Leaf | 17.956 |
| SRR9715739 | Root | 0.042 |
| SRR9715742 | Root | 0.528 |
| SRR9715743 | Root | 0.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.716 |
| SRR8749028 | MeJA induced 9h | 8.835 |
| SRR8749029 | MeJA induced 9h | 2.704 |
| SRR8749030 | Uninduced | 40.906 |
| SRR8749031 | Uninduced | 13.333 |
| SRR8749032 | Uninduced | 4.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.739 |
| SRR8400027 | Control - Root | 2.912 |