Gene detail

Gene detail information of Glyur000088s00007725.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47750.1	0	D6 protein kinase like 2
NR	KHN14413.1	0	Protein kinase G11A [Glycine soja]
COG	YP_001275872.1	1.00E-18	protein kinase [Roseiflexus sp. RS-1]
Swissprot	tr\|Q39183\|D6KL2_ARATH	0	Serine/threonine-protein kinase D6PKL2
trEMBL	tr\|K7LB98\|K7LB98_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G01800.2}

Sequence

Transcript Sequence

>Glyur000088s00007725.1
CCTTTGACCCCTCTCTCTCTCTCACTCACTGCCTAATAGTCCACTACCACAGGCCAAGAGCCTTGGCCCAGTCTAATTTTATGACTCTCTCTCTCTCTCTCTCTCTCTCTCCAAGGCCTAAGCTACTATCAGGAGAGAGCTCTCTCTTTCTCTCTATCTACAGTGGTACTTCTCTCTTCCTTTTTCTCTTCTCCCACTGCTAAAGCAACGAAGCTGAGTTTCTGATCCTTGAAATTAGGTCGTTTCTTATTTTTTTGAAGACATAAATGGATGCTAAGCCATGGATTTGGTCAATCTGATCTCAATTGAAACTCTTTAGCATTTCTGATGGACTCAAAAACTAGTGCCCGAGCTCTCCCGAAACATCATCAGAAGACAGCTGGGACTCAAAACTCCGAGGCAAAAGACATCAAGCCTTCTTCGCTGCTGGTTCCAAAAACAGGCAAACCTGAGCTGGCTGCTCCTGAAGATTTGTCTAAGTCTGTACAAAACACATCAAAGCAGAAAATTGGGGAAGTTTCTGAAAGCAAGAAGTTGGGGGCTTCGGTCCCAAAGGGGTCTGCTGATTCATTGAGTAGTAAATGTGGTTCTGGTGCTTCGTCGTCTGCTCCGGACAAAGCGTCTGGAGAAGTAGATCATGCTGTTAATGTGAACATAGGCTTACAGAAAATCTCTCTTGATCAAGAGAAAAAGACGTCGGAATATGGAAGTGTGAAGAACAGTTCTGTTTCCGCAAAAGTTAGCGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGTAGTGCTAAGATCAGTGACCGAGCTGATTTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAAGCAAACGACATGAGATGGGAAGCTATCCAAGCTGTTCGAACTAAAGATGGGGCATTGGGTTTAGGTCATTTTAGACTTCTGAAGAGGTTGGGTTGTGGAGATATTGGCAGTGTATACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTTGCAAGTCGTAAAAAGCTACTTCGTGCTCAGACAGAAAGAGAAATCCTGCAGTCTCTTGACCACCCCTTTCTCCCAACTTTGTACACCCATTTCGAGACGGAGAAGTTTTCATGCTTGGTGATGGAATTCTGCCCAGGTGGAGACCTCCACACTCTTAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTTTATGTGGCAGAGGTCCTACTGGCTTTGGAGTACCTCCACATGCTTGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTCCTTGTTAGGGATGATGGGCATATAATGCTCTCTGACTTTGACCTCTCCCTCCGTTGTGCTGTTAGTCCAACCCTTGTTAAAACCTCATCCATGGATTCTGAGCCTTTAAGAAAGAATCCTGTTTACTGTGTCCAGCCTGCATGTATTGAGCCGCCTTCCTGCATTCAGCCATCCTGTGTTGCTCCTACTACATGCTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAGGACCGGAAGCCCAAAAATGAAATCGGCAACCAAGTGAGTCCACTACCGGAGCTCATTGCAGAGCCTACTGATGCTCGGTCCATGTCATTTGTCGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGTGAAGGTCATGGGAGTGCTGTTGATTGGTGGACTTTTGGAATCTTTCTATACGAGCTGTTGTTTGGTAAAACTCCTTTTAAGGGATCCGGGAACCGAGCTACGCTGTTTAATGTCGTGGGTCAGCCCCTGCGATTTCCGGAAGCACCTGTTGTCAGTTTTGCTGCAAGGGACCTTATAAGGGGGTTGCTTGTAAAGGAACCTCAGCACCGATTGGCATATAAACGCGGGGCCACCGAGATTAAGCAACATCCCTTTTTCGAAGGTGTGAATTGGGCATTGATCCGATGTGCTACCCCACCTGAGATCCCAAAGGCTGTGGAGTTTGAGAAGATACCTTCCCCAGCCTCGTCAGCTGGTGAAAAGGCTGTTAACCACATGTCAGCAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAGAGATAGACAATATATTGATTGCAAAATGCAGGTTTCTGTTAGATGGGGGAAGGAACTGTTTTTCAAATGTTTCAGGAACAGATGATGAGGAATTGTATGTTTGTTTTTTTTTTTGTTGGCTATTTGCAGTTTCAGATTTGTATGGCATAATTAATGCATGGCTTCTCTGTCATCTCAAAAGGCATAAAAAAGGTAACATTTCTCCACTGACTGGCCAATGCATTAGGAATTTGAGCTGGCTAATGGTGGTGGTGGTGATGATGCTCTTAAGAGTCCCTATGGTAAGTGCAATTGTAAGAAAAAAGGGGACATTTTCTGCCTAGGGATTCACCATTCATTGTCAACTTGTTAAGGAAAAGCAATATCTAAATCCAAAAGCAACTAAAATACAAATAGTTAGTTTATGTGTTTTGATCATGGCGAGATGGTTAGTAAGATTTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00088	195295	199936	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000088s00007725.1	PF00069.20	Pkinase	219	369	2.10E-35
Glyur000088s00007725.1	PF00069.20	Pkinase	451	557	8.60E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	53.191
SRR1783600	control	53.618
SRR1783602	moderate drought stress	56.266
SRR1811619	moderate drought stress	56.414

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	79.150
DRR006520	Root Summer glycyrrhizin high producing strain	78.211
DRR006521	Root Winter glycyrrhizin high producing strain	123.571
DRR006522	Root Winter glycyrrhizin high producing strain	120.307
DRR006523	Root Summer glycyrrhizin low producing strain	98.587
DRR006524	Root Summer glycyrrhizin low producing strain	98.833
DRR006525	Leaf Summer glycyrrhizin high producing strain	43.637
DRR006526	Leaf Summer glycyrrhizin high producing strain	43.640

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	74.981
SRR2868004	Drought Stress (root)	75.561
SRR2967015	Control (root)	84.511

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	60.315
SRR9715740	Leaf	78.723
SRR9715741	Leaf	74.837
SRR9715739	Root	55.896
SRR9715742	Root	72.415
SRR9715743	Root	69.950

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	65.424
SRR8749028	MeJA induced 9h	57.031
SRR8749029	MeJA induced 9h	41.102
SRR8749030	Uninduced	37.118
SRR8749031	Uninduced	19.027
SRR8749032	Uninduced	22.348

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	60.230
SRR8400027	Control - Root	66.380