Gene detail information of Glyur000088s00007712 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003594345.1 | 1.26E-27 | hypothetical protein MTR_2g027550 [Medicago truncatula] |
| trEMBL | tr|G7IQ54|G7IQ54_MEDTR | 5.00E-28 | Transmembrane protein, putative {ECO:0000313|EMBL:AES64596.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 129699 | 130669 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.217 |
| SRR1783600 | control | 0.218 |
| SRR1783602 | moderate drought stress | 2.732 |
| SRR1811619 | moderate drought stress | 2.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1680.229 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1642.089 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.488 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.510 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.634 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.051 |
| SRR2868004 | Drought Stress (root) | 18.112 |
| SRR2967015 | Control (root) | 17.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.833 |
| SRR9715740 | Leaf | 4.971 |
| SRR9715741 | Leaf | 21.237 |
| SRR9715739 | Root | 1.780 |
| SRR9715742 | Root | 6.087 |
| SRR9715743 | Root | 3.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 186.701 |
| SRR8749028 | MeJA induced 9h | 128.485 |
| SRR8749029 | MeJA induced 9h | 162.061 |
| SRR8749030 | Uninduced | 467.633 |
| SRR8749031 | Uninduced | 613.755 |
| SRR8749032 | Uninduced | 859.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.723 |
| SRR8400027 | Control - Root | 4.871 |