Gene detail information of Glyur000088s00007690 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17150.1 | 1.00E-110 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004486396.1 | 0 | PREDICTED: uncharacterized protein LOC101505258 isoform X1 [Cicer arietinum] |
| COG | YP_008801136.1 | 2.00E-13 | peptidase S15 [Exiguobacterium sp. MH3] |
| trEMBL | tr|K7LBB5|K7LBB5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02051.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 21916 | 27211 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000088s00007690.1 | PF12695.2 | Abhydrolase_5 | 46 | 213 | 8.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.640 |
| SRR1783600 | control | 1.866 |
| SRR1783602 | moderate drought stress | 2.019 |
| SRR1811619 | moderate drought stress | 2.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.826 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.674 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.646 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.625 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.850 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.750 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.240 |
| SRR2868004 | Drought Stress (root) | 7.443 |
| SRR2967015 | Control (root) | 9.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.910 |
| SRR9715740 | Leaf | 1.792 |
| SRR9715741 | Leaf | 2.235 |
| SRR9715739 | Root | 0.167 |
| SRR9715742 | Root | 0.830 |
| SRR9715743 | Root | 0.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.384 |
| SRR8749028 | MeJA induced 9h | 4.226 |
| SRR8749029 | MeJA induced 9h | 4.370 |
| SRR8749030 | Uninduced | 5.081 |
| SRR8749031 | Uninduced | 2.930 |
| SRR8749032 | Uninduced | 4.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.079 |
| SRR8400027 | Control - Root | 6.897 |