Gene detail information of Glyur000088s00007687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003594398.1 | 8.33E-129 | hypothetical protein MTR_2g028180 [Medicago truncatula] |
| trEMBL | tr|G7ISR7|G7ISR7_MEDTR | 3.00E-129 | Uncharacterized protein {ECO:0000313|EMBL:AES64649.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 14246 | 15238 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.798 |
| SRR1783600 | control | 2.800 |
| SRR1783602 | moderate drought stress | 7.377 |
| SRR1811619 | moderate drought stress | 7.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.861 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.778 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.785 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.557 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.527 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.952 |
| SRR2868004 | Drought Stress (root) | 22.659 |
| SRR2967015 | Control (root) | 11.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.922 |
| SRR9715740 | Leaf | 2.240 |
| SRR9715741 | Leaf | 5.999 |
| SRR9715739 | Root | 0.150 |
| SRR9715742 | Root | 1.756 |
| SRR9715743 | Root | 1.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.783 |
| SRR8749028 | MeJA induced 9h | 9.019 |
| SRR8749029 | MeJA induced 9h | 3.412 |
| SRR8749030 | Uninduced | 8.130 |
| SRR8749031 | Uninduced | 7.525 |
| SRR8749032 | Uninduced | 3.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.628 |
| SRR8400027 | Control - Root | 12.923 |