Gene detail information of Glyur000087s00008586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23690.1 | 1.00E-34 | |
| NR | XP_007156867.1 | 1.41E-75 | hypothetical protein PHAVU_002G024200g [Phaseolus vulgaris] |
| trEMBL | tr|V7CIX4|V7CIX4_PHAVU | 5.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:ESW28861.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 355263 | 355927 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000087s00008586.1 | PF14009.1 | DUF4228 | 30 | 128 | 1.40E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.860 |
| SRR1783600 | control | 2.019 |
| SRR1783602 | moderate drought stress | 8.052 |
| SRR1811619 | moderate drought stress | 8.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.344 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.645 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.005 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.385 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.799 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.104 |
| SRR2868004 | Drought Stress (root) | 0.515 |
| SRR2967015 | Control (root) | 0.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.018 |
| SRR9715740 | Leaf | 1.004 |
| SRR9715741 | Leaf | 1.212 |
| SRR9715739 | Root | 39.841 |
| SRR9715742 | Root | 10.114 |
| SRR9715743 | Root | 16.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.840 |
| SRR8749028 | MeJA induced 9h | 4.426 |
| SRR8749029 | MeJA induced 9h | 4.043 |
| SRR8749030 | Uninduced | 1.558 |
| SRR8749031 | Uninduced | 0.069 |
| SRR8749032 | Uninduced | 5.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.901 |
| SRR8400027 | Control - Root | 2.632 |