Gene detail information of Glyur000087s00008579 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23670.1 | 6.00E-28 | homolog of Synechocystis YCF37 |
| NR | XP_003517273.1 | 7.11E-73 | PREDICTED: uncharacterized protein LOC100780194 [Glycine max] |
| trEMBL | tr|I1J933|I1J933_SOYBN | 3.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G38940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00087 | 323344 | 323856 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.850 |
| SRR1783600 | control | 8.495 |
| SRR1783602 | moderate drought stress | 3.529 |
| SRR1811619 | moderate drought stress | 3.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.293 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.164 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.859 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.547 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.620 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 175.381 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 174.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.707 |
| SRR2868004 | Drought Stress (root) | 3.785 |
| SRR2967015 | Control (root) | 3.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.327 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 17.111 |
| SRR9715739 | Root | 4.939 |
| SRR9715742 | Root | 4.370 |
| SRR9715743 | Root | 1.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.709 |
| SRR8749028 | MeJA induced 9h | 1.381 |
| SRR8749029 | MeJA induced 9h | 1.457 |
| SRR8749030 | Uninduced | 0.504 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.351 |
| SRR8400027 | Control - Root | 0.055 |