Gene detail

Gene detail information of Glyur000087s00008572

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25160.1	8.00E-84	cytochrome P450, family 82, subfamily F, polypeptide 1
NR	KHN42045.1	8.97E-156	Cytochrome P450 82C4 [Glycine soja]
COG	YP_003513810.1	2.00E-28	cytochrome P450 [Stackebrandtia nassauensis DSM 44728]
Swissprot	tr\|O49858\|C82A3_SOYBN	8.00E-102	Cytochrome P450 82A3
trEMBL	tr\|I1LHI8\|I1LHI8_SOYBN	4.00E-155	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G06390.1}

Sequence

Transcript Sequence

>Glyur000087s00008572.1
ATGGTGGTAGTGATGGTGGTTATGCAGAAGGTGAAGCAAGAAGGCTATGAAGAGAACCTTGCTGAGGAATTGGACACTCTTGCTGAAGGGTGGCTGGAGGAACACAAAAGGAGAAGAGCTGATTTGGGTGAGAATGGAAAGGAAGAAAAGGATTTCATGGATGTCATGCTGAATGTTGTGNAGGATGATGCAGAGATTTGTGGTTATGATTCAGATACCATCATCAAGGCTACTTGCCTGAATCTGATTTTAGCAGGAAGTGACACCACCACAGTGGCTCTAACATGGGCGCTGTCCCTATTACTCAACCATCAAGTGGAACTTAAAAAGGCCCAAGATGAGTTGGACACTCATATTGGGAAGGAGAGGANGGTGGAAGAATCTGACATAAAGAACCTAGTCTACCTCCAAGCCATTGTCAAGGAAACACTGCGTCTCTATCCACCAAGTCCCATTATCACCCTGCGNGCAGCCATGGATGACTGCACTTTTTCATGCGGTTTTCACATTCCTTCCGGTACACATCTGATGGTGAATGTTTGGAAGATCCACCGGGATGGTCGTGTTTGGAATGACCCTCATGATTTCAAGCCAGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTGAGGAGTCGGAACTATGAGCTCGTCCCTTTNGGTTCTGGAAGGCGAGCATGCCCTGGTGCCTCATTGGCTCTGCGAGTGGTGCACTTGACATTGGCTACACTGTTACACTCTTTCAATGTTGCTTCCCCTTTAAATCAAGTAGTAGACATGACAGAAAGCACTGGACTCACCAATTTAAAACCAACCCCGCTTGAAGTTGTCATAACACCACGTCTAGANACCAAGCTTTATGAGGACTAGATTGTATTATATTATAGGCTAGTTTTTTCCAAAATAAGTGCAAGACNTTCAATGGAGCTGTGCTGTATTGTGATAAATTGATAGCTAGTGCAATTTGTATGTGATTCACATTCAGCAATTTTACTTTCTACCACTCAAAAAAGTGAAGGGAATGAATAACTTTCCTGTATCTTATGCCATCGACAAACAGGATAATACCAGAGAGCCGAGTTAGAAGCTTAAGCCTGAATCATCATCATACGGCAGCCGTGAGTATCATGTATTGCATACAAAAGCCGGTTTGCAACTAAAATATAAGTTGAAGGACCGGCTAACAGTGATTATACAAATTCAAACATNAAGATATTACTTTACCATATAAAAAATTATGAATTTGATCATTACACCTTGATCTGTGAGGCATGTACTGACTGATACTGAATCACTTATGCCGCGTGAAATCTTACCTACATGTGTCTAGTGCATCTTACAAGTCCATAGNTTGTAGAAGGTACATTCCGTGTTACTCCTAGTTAGCAATATATGTACAAGGACAGAATTCAAGTCACACACAAGTATGACTTGCAACTCATGCCTGAATTAGCAATCAATGAGAGAATGAACTCGCCTCAGTGCTATACATTGAGTACTCACTTAAGCTAAAGTTTGGTCTCTCTTCATTCCACTTCAAAATTTCCTTGNCGTATTTAAGTGCAGAATCAACACTACCAGGCTCCAACCCCTTCACCACTGACACAAACAACTTCCGTCCTGTAAGAGATGAATAAAGCCTCTTAAACTTAACCCCAATGTAGTGGGAAGCCAGATGACCAAGTGAGGGATTATTATTAATGCTGTTGCTATTGCTGTTGGTGCGGTTGCGGCTAACTATTGGATGGAAATCAGAAAACCAGTCACACTTGGTCAAAGGAACTTGTTCGATCTTCTCCTCAAAAAGATCAAATTTGTTCAATATCAACAGGAAGTCCATTTGCTCAAAAGTTGGATGAGTGACAATGGTTTCAAAAAACTTCCTGCTCAATATCATCTTGTTAGTGGGACAACCATTTCCATCNATGGAAAGCTGATCATAGTCACTCAAGGAAACACAGAAGATGACCATTTCAACATCCTCAAACATCTCTAGCCACTTGCAATTTTCTCCTAGCCCCCTTGCATGCATTCTAATTAGCTGATACCTGTTGATCAACCAGAAAGTATAAATCATCAGAAACATTCAATAGCAGTTGTAACAATTGGCTTTNTCCCCTCCAAATAATTATAGAGAAAAGTTACATATCTGAACACAGGCATGTGTGGTAAGGAACACATAAATTTGCTCACAAGACAGATTTACATATATGAAAATCAGTAACATCATTGGATATGTTCGACATAATTTAGATATGCTTTTGAGAATAATAGTATTCCAAGTATTGGAAACACAAAAATTTGAATGCATCTTTCTTGTGAGAAACAGAGTTTAACTTTTACACACTGCACCTGATTCTAAAAATACTTGGATAGCCATTCCAGAATGATATTAGCACTTCTATCCAATGAATATAAAAATTGATCTAAAATATTAAATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00087	287478	290390	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP82F1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000087s00008572.1	PF00067.17	p450	23	270	3.30E-60

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.162
SRR1783600	control	13.006
SRR1783602	moderate drought stress	35.322
SRR1811619	moderate drought stress	33.614

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.354
DRR006520	Root Summer glycyrrhizin high producing strain	15.127
DRR006521	Root Winter glycyrrhizin high producing strain	14.975
DRR006522	Root Winter glycyrrhizin high producing strain	15.220
DRR006523	Root Summer glycyrrhizin low producing strain	16.742
DRR006524	Root Summer glycyrrhizin low producing strain	16.490
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.067
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.149

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.555
SRR2868004	Drought Stress (root)	13.025
SRR2967015	Control (root)	12.659

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.714
SRR9715740	Leaf	10.952
SRR9715741	Leaf	9.633
SRR9715739	Root	4.670
SRR9715742	Root	8.007
SRR9715743	Root	8.767

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.594
SRR8749028	MeJA induced 9h	21.534
SRR8749029	MeJA induced 9h	12.841
SRR8749030	Uninduced	4.533
SRR8749031	Uninduced	2.716
SRR8749032	Uninduced	4.727

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.388
SRR8400027	Control - Root	7.960